Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.81■□□□□ 0.44
Pkd1l3Q2EG98 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.81■□□□□ 0.44
Pkd1l3Q2EG98 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pkd1l3Q2EG98 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pkd1l3Q2EG98 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.81■□□□□ 0.44
Pkd1l3Q2EG98 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pkd1l3Q2EG98 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pkd1l3Q2EG98 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pkd1l3Q2EG98 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pkd1l3Q2EG98 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pkd1l3Q2EG98 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pkd1l3Q2EG98 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pkd1l3Q2EG98 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pkd1l3Q2EG98 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pkd1l3Q2EG98 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pkd1l3Q2EG98 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pkd1l3Q2EG98 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.8■□□□□ 0.44
Pkd1l3Q2EG98 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pkd1l3Q2EG98 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pkd1l3Q2EG98 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pkd1l3Q2EG98 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pkd1l3Q2EG98 Gm7291-201ENSMUST00000199147 382 ntBASIC17.79■□□□□ 0.44
Pkd1l3Q2EG98 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pkd1l3Q2EG98 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pkd1l3Q2EG98 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pkd1l3Q2EG98 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pkd1l3Q2EG98 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pkd1l3Q2EG98 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pkd1l3Q2EG98 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pkd1l3Q2EG98 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Pkd1l3Q2EG98 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pkd1l3Q2EG98 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pkd1l3Q2EG98 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pkd1l3Q2EG98 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pkd1l3Q2EG98 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pkd1l3Q2EG98 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pkd1l3Q2EG98 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pkd1l3Q2EG98 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.78■□□□□ 0.44
Pkd1l3Q2EG98 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pkd1l3Q2EG98 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pkd1l3Q2EG98 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pkd1l3Q2EG98 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pkd1l3Q2EG98 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pkd1l3Q2EG98 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pkd1l3Q2EG98 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pkd1l3Q2EG98 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.78■□□□□ 0.44
Pkd1l3Q2EG98 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.77■□□□□ 0.44
Pkd1l3Q2EG98 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pkd1l3Q2EG98 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pkd1l3Q2EG98 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pkd1l3Q2EG98 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pkd1l3Q2EG98 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pkd1l3Q2EG98 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pkd1l3Q2EG98 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pkd1l3Q2EG98 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pkd1l3Q2EG98 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pkd1l3Q2EG98 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pkd1l3Q2EG98 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pkd1l3Q2EG98 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pkd1l3Q2EG98 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pkd1l3Q2EG98 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.76■□□□□ 0.43
Pkd1l3Q2EG98 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pkd1l3Q2EG98 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pkd1l3Q2EG98 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pkd1l3Q2EG98 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
Pkd1l3Q2EG98 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pkd1l3Q2EG98 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pkd1l3Q2EG98 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Pkd1l3Q2EG98 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.76■□□□□ 0.43
Pkd1l3Q2EG98 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pkd1l3Q2EG98 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pkd1l3Q2EG98 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pkd1l3Q2EG98 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pkd1l3Q2EG98 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.75■□□□□ 0.43
Pkd1l3Q2EG98 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pkd1l3Q2EG98 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pkd1l3Q2EG98 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pkd1l3Q2EG98 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pkd1l3Q2EG98 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pkd1l3Q2EG98 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pkd1l3Q2EG98 AV356131-201ENSMUST00000206201 750 ntBASIC17.75■□□□□ 0.43
Pkd1l3Q2EG98 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pkd1l3Q2EG98 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pkd1l3Q2EG98 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pkd1l3Q2EG98 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.74■□□□□ 0.43
Pkd1l3Q2EG98 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pkd1l3Q2EG98 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pkd1l3Q2EG98 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pkd1l3Q2EG98 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pkd1l3Q2EG98 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pkd1l3Q2EG98 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pkd1l3Q2EG98 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.74■□□□□ 0.43
Pkd1l3Q2EG98 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.74■□□□□ 0.43
Pkd1l3Q2EG98 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pkd1l3Q2EG98 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pkd1l3Q2EG98 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pkd1l3Q2EG98 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pkd1l3Q2EG98 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.73■□□□□ 0.43
Pkd1l3Q2EG98 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pkd1l3Q2EG98 Gm27801-201ENSMUST00000184174 223 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms