Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim72Q1XH17 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Trim72Q1XH17 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim72Q1XH17 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim72Q1XH17 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim72Q1XH17 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Trim72Q1XH17 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim72Q1XH17 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim72Q1XH17 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.18■□□□□ 0.98
Trim72Q1XH17 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim72Q1XH17 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim72Q1XH17 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim72Q1XH17 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim72Q1XH17 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim72Q1XH17 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Trim72Q1XH17 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim72Q1XH17 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Trim72Q1XH17 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.17■□□□□ 0.98
Trim72Q1XH17 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.17■□□□□ 0.98
Trim72Q1XH17 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim72Q1XH17 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim72Q1XH17 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Trim72Q1XH17 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim72Q1XH17 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim72Q1XH17 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim72Q1XH17 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim72Q1XH17 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim72Q1XH17 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim72Q1XH17 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim72Q1XH17 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim72Q1XH17 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim72Q1XH17 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim72Q1XH17 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim72Q1XH17 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Trim72Q1XH17 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim72Q1XH17 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim72Q1XH17 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim72Q1XH17 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim72Q1XH17 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim72Q1XH17 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim72Q1XH17 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim72Q1XH17 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trim72Q1XH17 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.14■□□□□ 0.97
Trim72Q1XH17 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim72Q1XH17 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim72Q1XH17 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim72Q1XH17 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim72Q1XH17 Notumos-201ENSMUST00000151998 2659 ntBASIC21.13■□□□□ 0.97
Trim72Q1XH17 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.13■□□□□ 0.97
Trim72Q1XH17 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Trim72Q1XH17 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim72Q1XH17 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim72Q1XH17 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim72Q1XH17 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.13■□□□□ 0.97
Trim72Q1XH17 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.13■□□□□ 0.97
Trim72Q1XH17 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim72Q1XH17 Gm21956-201ENSMUST00000179946 522 ntBASIC21.12■□□□□ 0.97
Trim72Q1XH17 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim72Q1XH17 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim72Q1XH17 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim72Q1XH17 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.11■□□□□ 0.97
Trim72Q1XH17 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.11■□□□□ 0.97
Trim72Q1XH17 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Trim72Q1XH17 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Trim72Q1XH17 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Trim72Q1XH17 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim72Q1XH17 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim72Q1XH17 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim72Q1XH17 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim72Q1XH17 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Trim72Q1XH17 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim72Q1XH17 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim72Q1XH17 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim72Q1XH17 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trim72Q1XH17 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.1■□□□□ 0.97
Trim72Q1XH17 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.1■□□□□ 0.97
Trim72Q1XH17 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trim72Q1XH17 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim72Q1XH17 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim72Q1XH17 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim72Q1XH17 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Trim72Q1XH17 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trim72Q1XH17 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim72Q1XH17 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim72Q1XH17 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.09■□□□□ 0.97
Trim72Q1XH17 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim72Q1XH17 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Trim72Q1XH17 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim72Q1XH17 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim72Q1XH17 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.09■□□□□ 0.97
Trim72Q1XH17 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim72Q1XH17 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Trim72Q1XH17 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim72Q1XH17 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim72Q1XH17 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.08■□□□□ 0.97
Trim72Q1XH17 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim72Q1XH17 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.08■□□□□ 0.97
Trim72Q1XH17 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.08■□□□□ 0.97
Trim72Q1XH17 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim72Q1XH17 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms