Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chd8Q09XV5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chd8Q09XV5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.13■□□□□ 0.49
Chd8Q09XV5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd8Q09XV5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Chd8Q09XV5 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Chd8Q09XV5 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chd8Q09XV5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd8Q09XV5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd8Q09XV5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chd8Q09XV5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd8Q09XV5 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chd8Q09XV5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.11■□□□□ 0.49
Chd8Q09XV5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chd8Q09XV5 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd8Q09XV5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Chd8Q09XV5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.1■□□□□ 0.49
Chd8Q09XV5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.1■□□□□ 0.49
Chd8Q09XV5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd8Q09XV5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.1■□□□□ 0.49
Chd8Q09XV5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chd8Q09XV5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd8Q09XV5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chd8Q09XV5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Chd8Q09XV5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.1■□□□□ 0.49
Chd8Q09XV5 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.1■□□□□ 0.49
Chd8Q09XV5 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.1■□□□□ 0.49
Chd8Q09XV5 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chd8Q09XV5 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.1■□□□□ 0.49
Chd8Q09XV5 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.09■□□□□ 0.49
Chd8Q09XV5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chd8Q09XV5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd8Q09XV5 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chd8Q09XV5 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Chd8Q09XV5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chd8Q09XV5 Gm12896-201ENSMUST00000118430 226 ntBASIC18.09■□□□□ 0.49
Chd8Q09XV5 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.09■□□□□ 0.49
Chd8Q09XV5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.08■□□□□ 0.49
Chd8Q09XV5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Chd8Q09XV5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chd8Q09XV5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Chd8Q09XV5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd8Q09XV5 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.08■□□□□ 0.48
Chd8Q09XV5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.08■□□□□ 0.48
Chd8Q09XV5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd8Q09XV5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chd8Q09XV5 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd8Q09XV5 Gm15378-201ENSMUST00000121894 207 ntBASIC18.07■□□□□ 0.48
Chd8Q09XV5 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd8Q09XV5 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.07■□□□□ 0.48
Chd8Q09XV5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Chd8Q09XV5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd8Q09XV5 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.07■□□□□ 0.48
Chd8Q09XV5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd8Q09XV5 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chd8Q09XV5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd8Q09XV5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chd8Q09XV5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Chd8Q09XV5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chd8Q09XV5 Gm13146-201ENSMUST00000118508 780 ntBASIC18.06■□□□□ 0.48
Chd8Q09XV5 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.06■□□□□ 0.48
Chd8Q09XV5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd8Q09XV5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd8Q09XV5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chd8Q09XV5 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.05■□□□□ 0.48
Chd8Q09XV5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.05■□□□□ 0.48
Chd8Q09XV5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd8Q09XV5 Gm17971-201ENSMUST00000190239 806 ntBASIC18.05■□□□□ 0.48
Chd8Q09XV5 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.05■□□□□ 0.48
Chd8Q09XV5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd8Q09XV5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.05■□□□□ 0.48
Chd8Q09XV5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Chd8Q09XV5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd8Q09XV5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chd8Q09XV5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd8Q09XV5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.04■□□□□ 0.48
Chd8Q09XV5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd8Q09XV5 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd8Q09XV5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd8Q09XV5 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd8Q09XV5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd8Q09XV5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd8Q09XV5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd8Q09XV5 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd8Q09XV5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.03■□□□□ 0.48
Chd8Q09XV5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd8Q09XV5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd8Q09XV5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd8Q09XV5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.03■□□□□ 0.48
Chd8Q09XV5 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.03■□□□□ 0.48
Chd8Q09XV5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd8Q09XV5 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Chd8Q09XV5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd8Q09XV5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Chd8Q09XV5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd8Q09XV5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chd8Q09XV5 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd8Q09XV5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.02■□□□□ 0.48
Chd8Q09XV5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd8Q09XV5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms