Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx3-2P97503 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx3-2P97503 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx3-2P97503 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx3-2P97503 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.67■□□□□ 0.58
Nkx3-2P97503 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx3-2P97503 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
Nkx3-2P97503 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx3-2P97503 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx3-2P97503 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx3-2P97503 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx3-2P97503 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Nkx3-2P97503 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Nkx3-2P97503 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx3-2P97503 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.66■□□□□ 0.58
Nkx3-2P97503 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx3-2P97503 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Nkx3-2P97503 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx3-2P97503 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nkx3-2P97503 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.66■□□□□ 0.58
Nkx3-2P97503 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Nkx3-2P97503 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx3-2P97503 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx3-2P97503 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx3-2P97503 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx3-2P97503 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Nkx3-2P97503 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx3-2P97503 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx3-2P97503 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.65■□□□□ 0.58
Nkx3-2P97503 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.65■□□□□ 0.58
Nkx3-2P97503 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx3-2P97503 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx3-2P97503 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx3-2P97503 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Nkx3-2P97503 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Nkx3-2P97503 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx3-2P97503 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.64■□□□□ 0.57
Nkx3-2P97503 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx3-2P97503 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx3-2P97503 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx3-2P97503 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx3-2P97503 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx3-2P97503 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.64■□□□□ 0.57
Nkx3-2P97503 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Nkx3-2P97503 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Nkx3-2P97503 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx3-2P97503 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
Nkx3-2P97503 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx3-2P97503 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx3-2P97503 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx3-2P97503 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx3-2P97503 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx3-2P97503 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx3-2P97503 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx3-2P97503 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx3-2P97503 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx3-2P97503 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Nkx3-2P97503 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx3-2P97503 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx3-2P97503 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx3-2P97503 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx3-2P97503 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx3-2P97503 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx3-2P97503 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx3-2P97503 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.62■□□□□ 0.57
Nkx3-2P97503 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx3-2P97503 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx3-2P97503 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Nkx3-2P97503 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx3-2P97503 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx3-2P97503 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nkx3-2P97503 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.61■□□□□ 0.57
Nkx3-2P97503 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx3-2P97503 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Nkx3-2P97503 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx3-2P97503 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx3-2P97503 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.61■□□□□ 0.57
Nkx3-2P97503 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx3-2P97503 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nkx3-2P97503 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.61■□□□□ 0.57
Nkx3-2P97503 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nkx3-2P97503 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Nkx3-2P97503 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Nkx3-2P97503 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.6■□□□□ 0.57
Nkx3-2P97503 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx3-2P97503 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx3-2P97503 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx3-2P97503 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx3-2P97503 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx3-2P97503 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.6■□□□□ 0.57
Nkx3-2P97503 Gm26833-201ENSMUST00000180899 440 ntBASIC18.6■□□□□ 0.57
Nkx3-2P97503 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.6■□□□□ 0.57
Nkx3-2P97503 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx3-2P97503 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Nkx3-2P97503 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx3-2P97503 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx3-2P97503 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx3-2P97503 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx3-2P97503 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nkx3-2P97503 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms