Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.12■□□□□ 0.81
Smad4P97471 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smad4P97471 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Smad4P97471 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smad4P97471 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smad4P97471 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smad4P97471 Gm6420-201ENSMUST00000193885 723 ntBASIC20.11■□□□□ 0.81
Smad4P97471 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smad4P97471 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.11■□□□□ 0.81
Smad4P97471 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smad4P97471 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smad4P97471 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smad4P97471 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smad4P97471 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smad4P97471 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.1■□□□□ 0.81
Smad4P97471 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.1■□□□□ 0.81
Smad4P97471 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.1■□□□□ 0.81
Smad4P97471 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smad4P97471 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smad4P97471 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Smad4P97471 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smad4P97471 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smad4P97471 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.09■□□□□ 0.81
Smad4P97471 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Smad4P97471 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smad4P97471 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Smad4P97471 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Smad4P97471 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smad4P97471 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smad4P97471 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Smad4P97471 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.08■□□□□ 0.81
Smad4P97471 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smad4P97471 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smad4P97471 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smad4P97471 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smad4P97471 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smad4P97471 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smad4P97471 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smad4P97471 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Smad4P97471 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smad4P97471 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smad4P97471 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smad4P97471 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smad4P97471 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Smad4P97471 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Smad4P97471 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smad4P97471 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smad4P97471 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smad4P97471 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smad4P97471 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smad4P97471 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.07■□□□□ 0.8
Smad4P97471 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smad4P97471 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Smad4P97471 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smad4P97471 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smad4P97471 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smad4P97471 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Smad4P97471 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smad4P97471 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.06■□□□□ 0.8
Smad4P97471 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.06■□□□□ 0.8
Smad4P97471 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smad4P97471 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Smad4P97471 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smad4P97471 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smad4P97471 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smad4P97471 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smad4P97471 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.05■□□□□ 0.8
Smad4P97471 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smad4P97471 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smad4P97471 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smad4P97471 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smad4P97471 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.04■□□□□ 0.8
Smad4P97471 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.04■□□□□ 0.8
Smad4P97471 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Smad4P97471 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.04■□□□□ 0.8
Smad4P97471 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smad4P97471 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smad4P97471 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.04■□□□□ 0.8
Smad4P97471 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Smad4P97471 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.04■□□□□ 0.8
Smad4P97471 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smad4P97471 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smad4P97471 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smad4P97471 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smad4P97471 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smad4P97471 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.03■□□□□ 0.8
Smad4P97471 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Smad4P97471 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.03■□□□□ 0.8
Smad4P97471 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smad4P97471 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smad4P97471 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smad4P97471 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smad4P97471 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smad4P97471 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smad4P97471 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.02■□□□□ 0.8
Smad4P97471 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smad4P97471 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.02■□□□□ 0.8
Smad4P97471 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Smad4P97471 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smad4P97471 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms