Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SgcbP82349 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SgcbP82349 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SgcbP82349 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SgcbP82349 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SgcbP82349 Gm8493-201ENSMUST00000196881 489 ntBASIC17.66■□□□□ 0.42
SgcbP82349 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SgcbP82349 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SgcbP82349 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SgcbP82349 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SgcbP82349 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SgcbP82349 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SgcbP82349 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
SgcbP82349 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SgcbP82349 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SgcbP82349 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SgcbP82349 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.65■□□□□ 0.42
SgcbP82349 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.65■□□□□ 0.42
SgcbP82349 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
SgcbP82349 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SgcbP82349 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SgcbP82349 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SgcbP82349 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.65■□□□□ 0.42
SgcbP82349 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
SgcbP82349 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
SgcbP82349 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SgcbP82349 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.64■□□□□ 0.41
SgcbP82349 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SgcbP82349 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SgcbP82349 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SgcbP82349 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SgcbP82349 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.64■□□□□ 0.41
SgcbP82349 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SgcbP82349 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SgcbP82349 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SgcbP82349 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcbP82349 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcbP82349 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcbP82349 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SgcbP82349 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.63■□□□□ 0.41
SgcbP82349 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.63■□□□□ 0.41
SgcbP82349 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.63■□□□□ 0.41
SgcbP82349 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcbP82349 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcbP82349 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SgcbP82349 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SgcbP82349 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SgcbP82349 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.63■□□□□ 0.41
SgcbP82349 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcbP82349 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SgcbP82349 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SgcbP82349 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcbP82349 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SgcbP82349 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.62■□□□□ 0.41
SgcbP82349 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcbP82349 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcbP82349 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcbP82349 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcbP82349 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcbP82349 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcbP82349 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcbP82349 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
SgcbP82349 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcbP82349 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SgcbP82349 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SgcbP82349 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SgcbP82349 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SgcbP82349 Spcs1-204ENSMUST00000226782 949 ntBASIC17.61■□□□□ 0.41
SgcbP82349 Gm6139-201ENSMUST00000079261 882 ntBASIC17.61■□□□□ 0.41
SgcbP82349 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SgcbP82349 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SgcbP82349 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SgcbP82349 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SgcbP82349 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SgcbP82349 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SgcbP82349 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcbP82349 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcbP82349 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SgcbP82349 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcbP82349 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SgcbP82349 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.6■□□□□ 0.41
SgcbP82349 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.6■□□□□ 0.41
SgcbP82349 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcbP82349 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcbP82349 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcbP82349 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcbP82349 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SgcbP82349 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SgcbP82349 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SgcbP82349 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcbP82349 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SgcbP82349 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcbP82349 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.59■□□□□ 0.41
SgcbP82349 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.59■□□□□ 0.41
SgcbP82349 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SgcbP82349 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcbP82349 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SgcbP82349 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.59■□□□□ 0.41
SgcbP82349 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SgcbP82349 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms