Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.48■□□□□ 0.71
Traf6P70196 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Traf6P70196 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Traf6P70196 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.48■□□□□ 0.71
Traf6P70196 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Traf6P70196 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Traf6P70196 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Traf6P70196 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Traf6P70196 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Traf6P70196 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Traf6P70196 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Traf6P70196 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Traf6P70196 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Traf6P70196 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Traf6P70196 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Traf6P70196 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Traf6P70196 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Traf6P70196 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Traf6P70196 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Traf6P70196 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Traf6P70196 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.46■□□□□ 0.71
Traf6P70196 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Traf6P70196 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Traf6P70196 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Traf6P70196 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Traf6P70196 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Traf6P70196 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Traf6P70196 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Traf6P70196 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Traf6P70196 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.45■□□□□ 0.7
Traf6P70196 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Traf6P70196 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Traf6P70196 Gm45102-201ENSMUST00000207427 857 ntBASIC19.45■□□□□ 0.7
Traf6P70196 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Traf6P70196 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Traf6P70196 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Traf6P70196 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Traf6P70196 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Traf6P70196 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.44■□□□□ 0.7
Traf6P70196 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Traf6P70196 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Traf6P70196 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.44■□□□□ 0.7
Traf6P70196 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Traf6P70196 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.44■□□□□ 0.7
Traf6P70196 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Traf6P70196 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.44■□□□□ 0.7
Traf6P70196 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Traf6P70196 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Traf6P70196 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Traf6P70196 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Traf6P70196 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Traf6P70196 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Traf6P70196 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.43■□□□□ 0.7
Traf6P70196 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.43■□□□□ 0.7
Traf6P70196 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Traf6P70196 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Traf6P70196 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Traf6P70196 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Traf6P70196 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Traf6P70196 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Traf6P70196 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Traf6P70196 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Traf6P70196 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Traf6P70196 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Traf6P70196 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Traf6P70196 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Traf6P70196 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Traf6P70196 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Traf6P70196 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Traf6P70196 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Traf6P70196 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Traf6P70196 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Traf6P70196 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Traf6P70196 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf6P70196 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Traf6P70196 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.41■□□□□ 0.7
Traf6P70196 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.41■□□□□ 0.7
Traf6P70196 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Traf6P70196 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Traf6P70196 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf6P70196 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.41■□□□□ 0.7
Traf6P70196 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf6P70196 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Traf6P70196 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.4■□□□□ 0.7
Traf6P70196 Gm14117-201ENSMUST00000122417 843 ntBASIC19.4■□□□□ 0.7
Traf6P70196 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Traf6P70196 Gm9959-201ENSMUST00000068277 390 ntBASIC19.4■□□□□ 0.7
Traf6P70196 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Traf6P70196 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Traf6P70196 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
Traf6P70196 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Traf6P70196 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.4■□□□□ 0.7
Traf6P70196 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Traf6P70196 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Traf6P70196 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
Traf6P70196 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Traf6P70196 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Traf6P70196 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Traf6P70196 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Traf6P70196 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms