Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Crnkl1P63154 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Crnkl1P63154 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Crnkl1P63154 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.5■□□□□ 0.71
Crnkl1P63154 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Crnkl1P63154 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
Crnkl1P63154 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Crnkl1P63154 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Crnkl1P63154 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Crnkl1P63154 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Crnkl1P63154 Gm45444-201ENSMUST00000211394 898 ntBASIC19.49■□□□□ 0.71
Crnkl1P63154 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Crnkl1P63154 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Crnkl1P63154 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Crnkl1P63154 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Crnkl1P63154 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Crnkl1P63154 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Crnkl1P63154 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Crnkl1P63154 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.48■□□□□ 0.71
Crnkl1P63154 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Crnkl1P63154 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.48■□□□□ 0.71
Crnkl1P63154 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Crnkl1P63154 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Crnkl1P63154 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Crnkl1P63154 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Crnkl1P63154 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Crnkl1P63154 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Crnkl1P63154 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Crnkl1P63154 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
Crnkl1P63154 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Crnkl1P63154 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Crnkl1P63154 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Crnkl1P63154 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Crnkl1P63154 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Crnkl1P63154 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Crnkl1P63154 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Crnkl1P63154 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.46■□□□□ 0.71
Crnkl1P63154 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.46■□□□□ 0.71
Crnkl1P63154 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.46■□□□□ 0.71
Crnkl1P63154 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Crnkl1P63154 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Crnkl1P63154 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Crnkl1P63154 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.45■□□□□ 0.7
Crnkl1P63154 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Crnkl1P63154 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Crnkl1P63154 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Crnkl1P63154 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Crnkl1P63154 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Crnkl1P63154 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Crnkl1P63154 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Crnkl1P63154 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Crnkl1P63154 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Crnkl1P63154 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Crnkl1P63154 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Crnkl1P63154 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.44■□□□□ 0.7
Crnkl1P63154 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Crnkl1P63154 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Crnkl1P63154 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Crnkl1P63154 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Crnkl1P63154 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Crnkl1P63154 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Crnkl1P63154 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Crnkl1P63154 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Crnkl1P63154 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Crnkl1P63154 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Crnkl1P63154 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Crnkl1P63154 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Crnkl1P63154 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Crnkl1P63154 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Crnkl1P63154 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Crnkl1P63154 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Crnkl1P63154 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Crnkl1P63154 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.43■□□□□ 0.7
Crnkl1P63154 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Crnkl1P63154 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.43■□□□□ 0.7
Crnkl1P63154 Gm43566-201ENSMUST00000196851 808 ntBASIC19.43■□□□□ 0.7
Crnkl1P63154 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Crnkl1P63154 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Crnkl1P63154 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.43■□□□□ 0.7
Crnkl1P63154 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Crnkl1P63154 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Crnkl1P63154 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Crnkl1P63154 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Crnkl1P63154 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Crnkl1P63154 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Crnkl1P63154 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Crnkl1P63154 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Crnkl1P63154 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Crnkl1P63154 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Crnkl1P63154 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Crnkl1P63154 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.42■□□□□ 0.7
Crnkl1P63154 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Crnkl1P63154 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Crnkl1P63154 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Crnkl1P63154 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Crnkl1P63154 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Crnkl1P63154 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Crnkl1P63154 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.41■□□□□ 0.7
Crnkl1P63154 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.41■□□□□ 0.7
Crnkl1P63154 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms