Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Lsm6P62313 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.38■□□□□ 0.37
Lsm6P62313 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm6P62313 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm6P62313 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Lsm6P62313 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm6P62313 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm6P62313 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.38■□□□□ 0.37
Lsm6P62313 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.38■□□□□ 0.37
Lsm6P62313 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.38■□□□□ 0.37
Lsm6P62313 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm6P62313 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.38■□□□□ 0.37
Lsm6P62313 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm6P62313 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm6P62313 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Lsm6P62313 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Lsm6P62313 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Lsm6P62313 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.38■□□□□ 0.37
Lsm6P62313 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.37■□□□□ 0.37
Lsm6P62313 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Lsm6P62313 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm6P62313 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Lsm6P62313 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.37■□□□□ 0.37
Lsm6P62313 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm6P62313 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm6P62313 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm6P62313 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Lsm6P62313 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Lsm6P62313 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm6P62313 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.36■□□□□ 0.37
Lsm6P62313 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm6P62313 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm6P62313 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Lsm6P62313 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Lsm6P62313 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Lsm6P62313 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm6P62313 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm6P62313 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Lsm6P62313 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm6P62313 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm6P62313 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm6P62313 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm6P62313 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Lsm6P62313 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.35■□□□□ 0.37
Lsm6P62313 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.35■□□□□ 0.37
Lsm6P62313 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Lsm6P62313 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lsm6P62313 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm6P62313 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm6P62313 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Lsm6P62313 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.34■□□□□ 0.37
Lsm6P62313 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm6P62313 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm6P62313 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm6P62313 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm6P62313 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Lsm6P62313 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lsm6P62313 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lsm6P62313 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Lsm6P62313 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm6P62313 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Lsm6P62313 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm6P62313 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm6P62313 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lsm6P62313 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.32■□□□□ 0.36
Lsm6P62313 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm6P62313 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm6P62313 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.32■□□□□ 0.36
Lsm6P62313 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.32■□□□□ 0.36
Lsm6P62313 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.32■□□□□ 0.36
Lsm6P62313 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm6P62313 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm6P62313 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm6P62313 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Lsm6P62313 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm6P62313 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lsm6P62313 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Lsm6P62313 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm6P62313 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Lsm6P62313 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm6P62313 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm6P62313 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.31■□□□□ 0.36
Lsm6P62313 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm6P62313 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.31■□□□□ 0.36
Lsm6P62313 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Lsm6P62313 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Lsm6P62313 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lsm6P62313 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm6P62313 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm6P62313 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm6P62313 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.3■□□□□ 0.36
Lsm6P62313 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm6P62313 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Lsm6P62313 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.3■□□□□ 0.36
Lsm6P62313 Gm9847-201ENSMUST00000052528 599 ntBASIC17.3■□□□□ 0.36
Lsm6P62313 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm6P62313 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lsm6P62313 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Lsm6P62313 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lsm6P62313 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms