Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SmoP56726 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SmoP56726 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.01■□□□□ 0.79
SmoP56726 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SmoP56726 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SmoP56726 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SmoP56726 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20■□□□□ 0.79
SmoP56726 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20■□□□□ 0.79
SmoP56726 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SmoP56726 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SmoP56726 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20■□□□□ 0.79
SmoP56726 Gm38160-201ENSMUST00000193090 2499 ntBASIC20■□□□□ 0.79
SmoP56726 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SmoP56726 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SmoP56726 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.99■□□□□ 0.79
SmoP56726 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SmoP56726 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SmoP56726 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SmoP56726 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SmoP56726 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SmoP56726 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SmoP56726 Gm40848-201ENSMUST00000221998 324 ntBASIC19.99■□□□□ 0.79
SmoP56726 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SmoP56726 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SmoP56726 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SmoP56726 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SmoP56726 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SmoP56726 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SmoP56726 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SmoP56726 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SmoP56726 Gm43060-201ENSMUST00000200621 289 ntBASIC19.98■□□□□ 0.79
SmoP56726 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SmoP56726 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SmoP56726 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SmoP56726 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SmoP56726 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SmoP56726 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SmoP56726 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SmoP56726 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SmoP56726 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SmoP56726 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SmoP56726 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SmoP56726 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SmoP56726 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SmoP56726 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SmoP56726 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SmoP56726 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SmoP56726 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SmoP56726 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SmoP56726 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.96■□□□□ 0.79
SmoP56726 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SmoP56726 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.96■□□□□ 0.79
SmoP56726 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SmoP56726 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SmoP56726 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SmoP56726 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.95■□□□□ 0.78
SmoP56726 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SmoP56726 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SmoP56726 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SmoP56726 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SmoP56726 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SmoP56726 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.95■□□□□ 0.78
SmoP56726 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SmoP56726 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SmoP56726 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SmoP56726 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SmoP56726 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SmoP56726 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SmoP56726 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SmoP56726 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SmoP56726 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SmoP56726 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SmoP56726 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.93■□□□□ 0.78
SmoP56726 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SmoP56726 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.93■□□□□ 0.78
SmoP56726 Gm11421-201ENSMUST00000122124 294 ntBASIC19.93■□□□□ 0.78
SmoP56726 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SmoP56726 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SmoP56726 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SmoP56726 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SmoP56726 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SmoP56726 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SmoP56726 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SmoP56726 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.92■□□□□ 0.78
SmoP56726 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.92■□□□□ 0.78
SmoP56726 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SmoP56726 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.92■□□□□ 0.78
SmoP56726 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.92■□□□□ 0.78
SmoP56726 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SmoP56726 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SmoP56726 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.92■□□□□ 0.78
SmoP56726 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SmoP56726 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.92■□□□□ 0.78
SmoP56726 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SmoP56726 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SmoP56726 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SmoP56726 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.91■□□□□ 0.78
SmoP56726 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SmoP56726 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SmoP56726 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms