Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NcanP55066 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NcanP55066 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NcanP55066 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NcanP55066 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NcanP55066 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NcanP55066 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
NcanP55066 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NcanP55066 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NcanP55066 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NcanP55066 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NcanP55066 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NcanP55066 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.26■□□□□ 0.99
NcanP55066 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NcanP55066 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
NcanP55066 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.26■□□□□ 0.99
NcanP55066 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NcanP55066 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NcanP55066 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
NcanP55066 Gm7290-201ENSMUST00000104990 617 ntBASIC21.25■□□□□ 0.99
NcanP55066 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
NcanP55066 Gm12918-201ENSMUST00000120234 636 ntBASIC21.25■□□□□ 0.99
NcanP55066 Gm15710-201ENSMUST00000121821 636 ntBASIC21.25■□□□□ 0.99
NcanP55066 Mir6236-201ENSMUST00000184437 123 ntBASIC21.25■□□□□ 0.99
NcanP55066 Gm6420-201ENSMUST00000193885 723 ntBASIC21.25■□□□□ 0.99
NcanP55066 Gm5075-201ENSMUST00000196916 622 ntBASIC21.25■□□□□ 0.99
NcanP55066 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.25■□□□□ 0.99
NcanP55066 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
NcanP55066 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.25■□□□□ 0.99
NcanP55066 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.25■□□□□ 0.99
NcanP55066 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NcanP55066 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NcanP55066 Gm13146-201ENSMUST00000118508 780 ntBASIC21.24■□□□□ 0.99
NcanP55066 Trmt13-210ENSMUST00000198454 880 ntBASIC21.24■□□□□ 0.99
NcanP55066 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC21.24■□□□□ 0.99
NcanP55066 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NcanP55066 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
NcanP55066 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
NcanP55066 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
NcanP55066 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.23■□□□□ 0.99
NcanP55066 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NcanP55066 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
NcanP55066 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NcanP55066 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.23■□□□□ 0.99
NcanP55066 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
NcanP55066 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.22■□□□□ 0.99
NcanP55066 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NcanP55066 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NcanP55066 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NcanP55066 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.22■□□□□ 0.99
NcanP55066 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.22■□□□□ 0.99
NcanP55066 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NcanP55066 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NcanP55066 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NcanP55066 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NcanP55066 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NcanP55066 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
NcanP55066 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NcanP55066 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NcanP55066 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.21■□□□□ 0.99
NcanP55066 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.21■□□□□ 0.99
NcanP55066 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NcanP55066 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
NcanP55066 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NcanP55066 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
NcanP55066 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
NcanP55066 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NcanP55066 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.2■□□□□ 0.98
NcanP55066 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NcanP55066 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NcanP55066 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NcanP55066 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NcanP55066 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NcanP55066 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
NcanP55066 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NcanP55066 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NcanP55066 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NcanP55066 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NcanP55066 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NcanP55066 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
NcanP55066 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NcanP55066 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
NcanP55066 Gm6211-202ENSMUST00000167849 925 ntBASIC21.19■□□□□ 0.98
NcanP55066 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.19■□□□□ 0.98
NcanP55066 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.19■□□□□ 0.98
NcanP55066 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NcanP55066 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
NcanP55066 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.19■□□□□ 0.98
NcanP55066 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NcanP55066 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NcanP55066 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NcanP55066 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NcanP55066 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NcanP55066 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NcanP55066 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NcanP55066 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NcanP55066 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.18■□□□□ 0.98
NcanP55066 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NcanP55066 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.18■□□□□ 0.98
NcanP55066 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms