Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fdft1P53798 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.73■□□□□ 0.75
Fdft1P53798 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fdft1P53798 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fdft1P53798 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.73■□□□□ 0.75
Fdft1P53798 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Fdft1P53798 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fdft1P53798 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Fdft1P53798 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fdft1P53798 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fdft1P53798 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fdft1P53798 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fdft1P53798 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Fdft1P53798 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.72■□□□□ 0.75
Fdft1P53798 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
Fdft1P53798 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Fdft1P53798 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Fdft1P53798 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Fdft1P53798 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fdft1P53798 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Fdft1P53798 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fdft1P53798 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Fdft1P53798 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Fdft1P53798 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fdft1P53798 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fdft1P53798 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Fdft1P53798 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fdft1P53798 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fdft1P53798 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fdft1P53798 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fdft1P53798 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Fdft1P53798 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Fdft1P53798 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Fdft1P53798 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.7■□□□□ 0.74
Fdft1P53798 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Fdft1P53798 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Fdft1P53798 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Fdft1P53798 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Fdft1P53798 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Fdft1P53798 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Fdft1P53798 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fdft1P53798 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fdft1P53798 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fdft1P53798 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fdft1P53798 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fdft1P53798 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.69■□□□□ 0.74
Fdft1P53798 Gm43530-201ENSMUST00000195920 274 ntBASIC19.69■□□□□ 0.74
Fdft1P53798 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fdft1P53798 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.69■□□□□ 0.74
Fdft1P53798 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fdft1P53798 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Fdft1P53798 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Fdft1P53798 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fdft1P53798 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Fdft1P53798 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.69■□□□□ 0.74
Fdft1P53798 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Fdft1P53798 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Fdft1P53798 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fdft1P53798 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Fdft1P53798 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fdft1P53798 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.68■□□□□ 0.74
Fdft1P53798 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fdft1P53798 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.68■□□□□ 0.74
Fdft1P53798 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Fdft1P53798 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Fdft1P53798 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.68■□□□□ 0.74
Fdft1P53798 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Fdft1P53798 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Fdft1P53798 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fdft1P53798 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fdft1P53798 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fdft1P53798 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fdft1P53798 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Fdft1P53798 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Fdft1P53798 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Fdft1P53798 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fdft1P53798 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Fdft1P53798 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fdft1P53798 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fdft1P53798 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Fdft1P53798 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fdft1P53798 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fdft1P53798 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fdft1P53798 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.65■□□□□ 0.74
Fdft1P53798 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.65■□□□□ 0.74
Fdft1P53798 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Fdft1P53798 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Fdft1P53798 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fdft1P53798 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fdft1P53798 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.64■□□□□ 0.73
Fdft1P53798 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Fdft1P53798 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fdft1P53798 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Fdft1P53798 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fdft1P53798 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fdft1P53798 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fdft1P53798 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
Fdft1P53798 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Fdft1P53798 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.64■□□□□ 0.73
Fdft1P53798 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms