Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Sox3P53784 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sox3P53784 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Sox3P53784 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sox3P53784 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Sox3P53784 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox3P53784 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Sox3P53784 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox3P53784 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sox3P53784 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox3P53784 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox3P53784 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox3P53784 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.88■□□□□ 0.61
Sox3P53784 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sox3P53784 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sox3P53784 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sox3P53784 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Sox3P53784 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox3P53784 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sox3P53784 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox3P53784 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox3P53784 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sox3P53784 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox3P53784 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.87■□□□□ 0.61
Sox3P53784 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox3P53784 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sox3P53784 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox3P53784 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox3P53784 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sox3P53784 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sox3P53784 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sox3P53784 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sox3P53784 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sox3P53784 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.86■□□□□ 0.61
Sox3P53784 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.86■□□□□ 0.61
Sox3P53784 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.86■□□□□ 0.61
Sox3P53784 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox3P53784 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Sox3P53784 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox3P53784 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox3P53784 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox3P53784 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sox3P53784 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox3P53784 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sox3P53784 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox3P53784 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox3P53784 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sox3P53784 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
Sox3P53784 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.85■□□□□ 0.61
Sox3P53784 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox3P53784 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Sox3P53784 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox3P53784 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Sox3P53784 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox3P53784 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox3P53784 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox3P53784 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox3P53784 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox3P53784 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sox3P53784 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Sox3P53784 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Sox3P53784 Golph3-202ENSMUST00000226517 2359 ntBASIC18.84■□□□□ 0.61
Sox3P53784 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox3P53784 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Sox3P53784 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sox3P53784 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Sox3P53784 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox3P53784 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.83■□□□□ 0.6
Sox3P53784 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox3P53784 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox3P53784 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox3P53784 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.83■□□□□ 0.6
Sox3P53784 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox3P53784 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox3P53784 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox3P53784 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox3P53784 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox3P53784 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox3P53784 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox3P53784 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Sox3P53784 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.82■□□□□ 0.6
Sox3P53784 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox3P53784 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Sox3P53784 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox3P53784 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox3P53784 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox3P53784 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sox3P53784 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sox3P53784 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.81■□□□□ 0.6
Sox3P53784 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.81■□□□□ 0.6
Sox3P53784 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sox3P53784 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox3P53784 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox3P53784 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.81■□□□□ 0.6
Sox3P53784 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Sox3P53784 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.81■□□□□ 0.6
Sox3P53784 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox3P53784 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox3P53784 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox3P53784 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms