Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pdx1P52946 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pdx1P52946 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pdx1P52946 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Pdx1P52946 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.64■□□□□ 0.73
Pdx1P52946 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.64■□□□□ 0.73
Pdx1P52946 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pdx1P52946 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pdx1P52946 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.64■□□□□ 0.73
Pdx1P52946 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pdx1P52946 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pdx1P52946 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pdx1P52946 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pdx1P52946 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Pdx1P52946 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pdx1P52946 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pdx1P52946 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Pdx1P52946 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Pdx1P52946 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pdx1P52946 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pdx1P52946 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pdx1P52946 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pdx1P52946 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pdx1P52946 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Pdx1P52946 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Pdx1P52946 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pdx1P52946 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pdx1P52946 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pdx1P52946 Gm27454-201ENSMUST00000185090 204 ntBASIC19.62■□□□□ 0.73
Pdx1P52946 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pdx1P52946 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pdx1P52946 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pdx1P52946 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pdx1P52946 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pdx1P52946 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pdx1P52946 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.61■□□□□ 0.73
Pdx1P52946 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pdx1P52946 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pdx1P52946 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pdx1P52946 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pdx1P52946 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pdx1P52946 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.6■□□□□ 0.73
Pdx1P52946 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pdx1P52946 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pdx1P52946 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pdx1P52946 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pdx1P52946 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pdx1P52946 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pdx1P52946 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pdx1P52946 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pdx1P52946 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Pdx1P52946 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pdx1P52946 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.6■□□□□ 0.73
Pdx1P52946 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Pdx1P52946 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdx1P52946 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdx1P52946 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdx1P52946 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pdx1P52946 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Pdx1P52946 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pdx1P52946 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.59■□□□□ 0.73
Pdx1P52946 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdx1P52946 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.59■□□□□ 0.73
Pdx1P52946 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdx1P52946 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pdx1P52946 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Pdx1P52946 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pdx1P52946 Gm12821-201ENSMUST00000120022 600 ntBASIC19.58■□□□□ 0.72
Pdx1P52946 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Pdx1P52946 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
Pdx1P52946 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pdx1P52946 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pdx1P52946 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pdx1P52946 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
Pdx1P52946 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pdx1P52946 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pdx1P52946 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pdx1P52946 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pdx1P52946 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdx1P52946 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdx1P52946 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdx1P52946 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pdx1P52946 Gm12251-201ENSMUST00000117893 792 ntBASIC19.57■□□□□ 0.72
Pdx1P52946 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pdx1P52946 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdx1P52946 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.57■□□□□ 0.72
Pdx1P52946 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.57■□□□□ 0.72
Pdx1P52946 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdx1P52946 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pdx1P52946 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pdx1P52946 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pdx1P52946 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Pdx1P52946 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pdx1P52946 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pdx1P52946 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.56■□□□□ 0.72
Pdx1P52946 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Pdx1P52946 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdx1P52946 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdx1P52946 Gm45417-201ENSMUST00000209533 758 ntBASIC19.55■□□□□ 0.72
Pdx1P52946 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms