Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RoraP51448 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RoraP51448 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RoraP51448 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RoraP51448 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RoraP51448 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RoraP51448 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RoraP51448 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RoraP51448 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RoraP51448 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RoraP51448 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.73■□□□□ 0.59
RoraP51448 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RoraP51448 Mir6236-201ENSMUST00000184437 123 ntBASIC18.73■□□□□ 0.59
RoraP51448 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RoraP51448 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RoraP51448 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RoraP51448 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.72■□□□□ 0.59
RoraP51448 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RoraP51448 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.72■□□□□ 0.59
RoraP51448 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.72■□□□□ 0.59
RoraP51448 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.72■□□□□ 0.59
RoraP51448 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
RoraP51448 Gm5874-201ENSMUST00000096101 508 ntBASIC18.72■□□□□ 0.59
RoraP51448 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RoraP51448 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RoraP51448 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RoraP51448 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RoraP51448 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RoraP51448 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RoraP51448 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.71■□□□□ 0.59
RoraP51448 Gm40848-201ENSMUST00000221998 324 ntBASIC18.71■□□□□ 0.59
RoraP51448 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RoraP51448 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RoraP51448 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RoraP51448 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.7■□□□□ 0.58
RoraP51448 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RoraP51448 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RoraP51448 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RoraP51448 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RoraP51448 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.7■□□□□ 0.58
RoraP51448 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RoraP51448 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RoraP51448 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RoraP51448 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RoraP51448 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.7■□□□□ 0.58
RoraP51448 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RoraP51448 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RoraP51448 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RoraP51448 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.69■□□□□ 0.58
RoraP51448 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RoraP51448 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RoraP51448 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RoraP51448 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RoraP51448 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RoraP51448 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.69■□□□□ 0.58
RoraP51448 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RoraP51448 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RoraP51448 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RoraP51448 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RoraP51448 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RoraP51448 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RoraP51448 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RoraP51448 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.68■□□□□ 0.58
RoraP51448 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RoraP51448 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RoraP51448 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RoraP51448 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RoraP51448 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RoraP51448 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RoraP51448 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RoraP51448 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RoraP51448 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RoraP51448 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RoraP51448 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RoraP51448 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RoraP51448 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RoraP51448 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RoraP51448 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.66■□□□□ 0.58
RoraP51448 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RoraP51448 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
RoraP51448 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RoraP51448 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.66■□□□□ 0.58
RoraP51448 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.66■□□□□ 0.58
RoraP51448 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
RoraP51448 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.66■□□□□ 0.58
RoraP51448 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RoraP51448 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RoraP51448 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
RoraP51448 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RoraP51448 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RoraP51448 Gm10493-201ENSMUST00000097270 612 ntBASIC18.65■□□□□ 0.58
RoraP51448 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RoraP51448 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
RoraP51448 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.65■□□□□ 0.58
RoraP51448 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RoraP51448 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RoraP51448 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
RoraP51448 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RoraP51448 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RoraP51448 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms