Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.15■□□□□ 0.66
Hnf4aP49698 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.15■□□□□ 0.66
Hnf4aP49698 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.15■□□□□ 0.66
Hnf4aP49698 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.15■□□□□ 0.66
Hnf4aP49698 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hnf4aP49698 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Hnf4aP49698 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hnf4aP49698 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hnf4aP49698 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hnf4aP49698 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hnf4aP49698 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hnf4aP49698 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hnf4aP49698 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hnf4aP49698 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.14■□□□□ 0.65
Hnf4aP49698 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hnf4aP49698 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hnf4aP49698 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hnf4aP49698 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hnf4aP49698 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Hnf4aP49698 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hnf4aP49698 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hnf4aP49698 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hnf4aP49698 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hnf4aP49698 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hnf4aP49698 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hnf4aP49698 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hnf4aP49698 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.13■□□□□ 0.65
Hnf4aP49698 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hnf4aP49698 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Hnf4aP49698 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Hnf4aP49698 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hnf4aP49698 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hnf4aP49698 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Hnf4aP49698 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hnf4aP49698 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hnf4aP49698 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hnf4aP49698 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hnf4aP49698 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Hnf4aP49698 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Hnf4aP49698 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hnf4aP49698 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hnf4aP49698 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hnf4aP49698 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hnf4aP49698 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hnf4aP49698 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hnf4aP49698 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hnf4aP49698 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Hnf4aP49698 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.11■□□□□ 0.65
Hnf4aP49698 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.11■□□□□ 0.65
Hnf4aP49698 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.11■□□□□ 0.65
Hnf4aP49698 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hnf4aP49698 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hnf4aP49698 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.11■□□□□ 0.65
Hnf4aP49698 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Hnf4aP49698 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hnf4aP49698 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hnf4aP49698 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.1■□□□□ 0.65
Hnf4aP49698 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hnf4aP49698 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hnf4aP49698 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.09■□□□□ 0.65
Hnf4aP49698 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hnf4aP49698 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hnf4aP49698 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Hnf4aP49698 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hnf4aP49698 Gm12922-201ENSMUST00000120626 809 ntBASIC19.09■□□□□ 0.65
Hnf4aP49698 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hnf4aP49698 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.09■□□□□ 0.65
Hnf4aP49698 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Hnf4aP49698 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hnf4aP49698 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hnf4aP49698 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hnf4aP49698 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.09■□□□□ 0.65
Hnf4aP49698 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hnf4aP49698 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hnf4aP49698 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hnf4aP49698 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hnf4aP49698 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Hnf4aP49698 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Hnf4aP49698 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hnf4aP49698 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Hnf4aP49698 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.08■□□□□ 0.64
Hnf4aP49698 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Hnf4aP49698 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hnf4aP49698 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hnf4aP49698 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.08■□□□□ 0.64
Hnf4aP49698 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hnf4aP49698 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hnf4aP49698 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Hnf4aP49698 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Hnf4aP49698 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hnf4aP49698 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hnf4aP49698 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Hnf4aP49698 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hnf4aP49698 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hnf4aP49698 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.07■□□□□ 0.64
Hnf4aP49698 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.07■□□□□ 0.64
Hnf4aP49698 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hnf4aP49698 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hnf4aP49698 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Hnf4aP49698 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms