Protein–RNA interactions for Protein: P46737

Brcc3, Lys-63-specific deubiquitinase BRCC36, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brcc3P46737 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Brcc3P46737 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Brcc3P46737 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Brcc3P46737 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Brcc3P46737 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.94■□□□□ 0.94
Brcc3P46737 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Brcc3P46737 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Brcc3P46737 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Brcc3P46737 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Brcc3P46737 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.94■□□□□ 0.94
Brcc3P46737 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Brcc3P46737 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Brcc3P46737 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Brcc3P46737 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.93■□□□□ 0.94
Brcc3P46737 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.93■□□□□ 0.94
Brcc3P46737 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.93■□□□□ 0.94
Brcc3P46737 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Brcc3P46737 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Brcc3P46737 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brcc3P46737 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Brcc3P46737 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brcc3P46737 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brcc3P46737 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.92■□□□□ 0.94
Brcc3P46737 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.92■□□□□ 0.94
Brcc3P46737 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brcc3P46737 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brcc3P46737 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brcc3P46737 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Brcc3P46737 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.92■□□□□ 0.94
Brcc3P46737 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Brcc3P46737 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Brcc3P46737 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.92■□□□□ 0.94
Brcc3P46737 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Brcc3P46737 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.91■□□□□ 0.94
Brcc3P46737 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Brcc3P46737 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brcc3P46737 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brcc3P46737 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.91■□□□□ 0.94
Brcc3P46737 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Brcc3P46737 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brcc3P46737 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brcc3P46737 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brcc3P46737 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brcc3P46737 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brcc3P46737 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Brcc3P46737 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
Brcc3P46737 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.9■□□□□ 0.94
Brcc3P46737 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Brcc3P46737 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Brcc3P46737 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Brcc3P46737 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Brcc3P46737 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Brcc3P46737 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Brcc3P46737 Gm42569-201ENSMUST00000200539 472 ntBASIC20.9■□□□□ 0.94
Brcc3P46737 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.9■□□□□ 0.94
Brcc3P46737 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Brcc3P46737 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Brcc3P46737 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Brcc3P46737 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Brcc3P46737 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Brcc3P46737 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Brcc3P46737 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Brcc3P46737 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Brcc3P46737 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Brcc3P46737 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Brcc3P46737 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Brcc3P46737 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Brcc3P46737 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Brcc3P46737 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Brcc3P46737 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Brcc3P46737 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Brcc3P46737 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Brcc3P46737 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.87■□□□□ 0.93
Brcc3P46737 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Brcc3P46737 Gm7291-201ENSMUST00000199147 382 ntBASIC20.87■□□□□ 0.93
Brcc3P46737 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Brcc3P46737 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Brcc3P46737 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Brcc3P46737 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Brcc3P46737 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Brcc3P46737 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.86■□□□□ 0.93
Brcc3P46737 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Brcc3P46737 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Brcc3P46737 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Brcc3P46737 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Brcc3P46737 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Brcc3P46737 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Brcc3P46737 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.85■□□□□ 0.93
Brcc3P46737 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Brcc3P46737 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brcc3P46737 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Brcc3P46737 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Brcc3P46737 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.85■□□□□ 0.93
Brcc3P46737 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Brcc3P46737 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Brcc3P46737 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Brcc3P46737 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Brcc3P46737 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Brcc3P46737 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Brcc3P46737 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms