Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-6P43688 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
Nkx2-6P43688 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-6P43688 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.77■□□□□ 0.6
Nkx2-6P43688 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.77■□□□□ 0.6
Nkx2-6P43688 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-6P43688 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-6P43688 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-6P43688 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx2-6P43688 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx2-6P43688 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-6P43688 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Nkx2-6P43688 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-6P43688 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-6P43688 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-6P43688 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.76■□□□□ 0.59
Nkx2-6P43688 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-6P43688 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-6P43688 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-6P43688 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-6P43688 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-6P43688 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-6P43688 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-6P43688 Gm11421-201ENSMUST00000122124 294 ntBASIC18.75■□□□□ 0.59
Nkx2-6P43688 Gm26571-201ENSMUST00000181399 666 ntBASIC18.75■□□□□ 0.59
Nkx2-6P43688 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-6P43688 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-6P43688 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.75■□□□□ 0.59
Nkx2-6P43688 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-6P43688 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-6P43688 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.74■□□□□ 0.59
Nkx2-6P43688 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.74■□□□□ 0.59
Nkx2-6P43688 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-6P43688 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-6P43688 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.74■□□□□ 0.59
Nkx2-6P43688 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-6P43688 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-6P43688 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-6P43688 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-6P43688 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-6P43688 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-6P43688 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.73■□□□□ 0.59
Nkx2-6P43688 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-6P43688 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-6P43688 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-6P43688 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-6P43688 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-6P43688 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-6P43688 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-6P43688 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Nkx2-6P43688 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-6P43688 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-6P43688 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-6P43688 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-6P43688 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-6P43688 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-6P43688 Gm42569-201ENSMUST00000200539 472 ntBASIC18.72■□□□□ 0.59
Nkx2-6P43688 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.72■□□□□ 0.59
Nkx2-6P43688 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.72■□□□□ 0.59
Nkx2-6P43688 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Nkx2-6P43688 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-6P43688 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-6P43688 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-6P43688 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-6P43688 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-6P43688 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Nkx2-6P43688 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Nkx2-6P43688 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-6P43688 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-6P43688 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-6P43688 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-6P43688 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Nkx2-6P43688 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-6P43688 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Nkx2-6P43688 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-6P43688 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Nkx2-6P43688 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Nkx2-6P43688 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.7■□□□□ 0.58
Nkx2-6P43688 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Nkx2-6P43688 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-6P43688 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-6P43688 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-6P43688 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-6P43688 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-6P43688 Gm10033-202ENSMUST00000211874 928 ntBASIC18.69■□□□□ 0.58
Nkx2-6P43688 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-6P43688 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Nkx2-6P43688 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-6P43688 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-6P43688 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-6P43688 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Nkx2-6P43688 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-6P43688 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Nkx2-6P43688 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-6P43688 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.68■□□□□ 0.58
Nkx2-6P43688 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-6P43688 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Nkx2-6P43688 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-6P43688 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Nkx2-6P43688 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms