Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Msh2P43247 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh2P43247 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh2P43247 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh2P43247 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Msh2P43247 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Msh2P43247 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Msh2P43247 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Msh2P43247 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.36■□□□□ 0.85
Msh2P43247 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh2P43247 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh2P43247 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh2P43247 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh2P43247 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh2P43247 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Msh2P43247 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Msh2P43247 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Msh2P43247 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Msh2P43247 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Msh2P43247 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
Msh2P43247 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh2P43247 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh2P43247 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Msh2P43247 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh2P43247 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Msh2P43247 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh2P43247 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Msh2P43247 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh2P43247 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh2P43247 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh2P43247 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh2P43247 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh2P43247 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh2P43247 Gm22238-201ENSMUST00000175222 88 ntBASIC20.34■□□□□ 0.85
Msh2P43247 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh2P43247 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.34■□□□□ 0.85
Msh2P43247 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh2P43247 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh2P43247 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh2P43247 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh2P43247 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh2P43247 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh2P43247 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Msh2P43247 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Msh2P43247 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Msh2P43247 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Msh2P43247 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.33■□□□□ 0.85
Msh2P43247 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.33■□□□□ 0.85
Msh2P43247 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.33■□□□□ 0.85
Msh2P43247 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.33■□□□□ 0.85
Msh2P43247 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Msh2P43247 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Msh2P43247 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Msh2P43247 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.33■□□□□ 0.84
Msh2P43247 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Msh2P43247 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh2P43247 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh2P43247 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh2P43247 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.32■□□□□ 0.84
Msh2P43247 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.32■□□□□ 0.84
Msh2P43247 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Msh2P43247 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Msh2P43247 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Msh2P43247 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Msh2P43247 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh2P43247 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Msh2P43247 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Msh2P43247 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Msh2P43247 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Msh2P43247 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh2P43247 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Msh2P43247 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.31■□□□□ 0.84
Msh2P43247 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh2P43247 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Msh2P43247 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh2P43247 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Msh2P43247 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Msh2P43247 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh2P43247 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Msh2P43247 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Msh2P43247 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Msh2P43247 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh2P43247 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh2P43247 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh2P43247 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.3■□□□□ 0.84
Msh2P43247 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh2P43247 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Msh2P43247 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Msh2P43247 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh2P43247 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Msh2P43247 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Msh2P43247 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh2P43247 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh2P43247 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Msh2P43247 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Msh2P43247 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh2P43247 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.29■□□□□ 0.84
Msh2P43247 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.29■□□□□ 0.84
Msh2P43247 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Msh2P43247 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms