Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.52■□□□□ 0.55
Sox6P40645 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sox6P40645 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sox6P40645 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sox6P40645 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Sox6P40645 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox6P40645 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sox6P40645 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.51■□□□□ 0.55
Sox6P40645 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.51■□□□□ 0.55
Sox6P40645 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sox6P40645 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sox6P40645 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Sox6P40645 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox6P40645 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox6P40645 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox6P40645 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sox6P40645 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sox6P40645 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.5■□□□□ 0.55
Sox6P40645 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Sox6P40645 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox6P40645 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sox6P40645 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.5■□□□□ 0.55
Sox6P40645 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.5■□□□□ 0.55
Sox6P40645 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sox6P40645 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox6P40645 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sox6P40645 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox6P40645 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.49■□□□□ 0.55
Sox6P40645 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.49■□□□□ 0.55
Sox6P40645 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox6P40645 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox6P40645 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox6P40645 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox6P40645 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox6P40645 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox6P40645 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.49■□□□□ 0.55
Sox6P40645 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sox6P40645 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sox6P40645 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.49■□□□□ 0.55
Sox6P40645 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox6P40645 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox6P40645 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox6P40645 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox6P40645 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sox6P40645 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.48■□□□□ 0.55
Sox6P40645 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox6P40645 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Sox6P40645 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sox6P40645 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox6P40645 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sox6P40645 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sox6P40645 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Sox6P40645 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox6P40645 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox6P40645 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sox6P40645 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Sox6P40645 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox6P40645 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox6P40645 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.47■□□□□ 0.55
Sox6P40645 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox6P40645 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
Sox6P40645 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sox6P40645 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox6P40645 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox6P40645 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox6P40645 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.46■□□□□ 0.55
Sox6P40645 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox6P40645 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox6P40645 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox6P40645 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox6P40645 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sox6P40645 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Sox6P40645 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Sox6P40645 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox6P40645 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox6P40645 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox6P40645 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox6P40645 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox6P40645 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox6P40645 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox6P40645 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox6P40645 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox6P40645 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Sox6P40645 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.45■□□□□ 0.54
Sox6P40645 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox6P40645 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox6P40645 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox6P40645 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox6P40645 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox6P40645 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Sox6P40645 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sox6P40645 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox6P40645 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox6P40645 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Sox6P40645 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox6P40645 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox6P40645 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox6P40645 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.43■□□□□ 0.54
Sox6P40645 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sox6P40645 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms