Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Thbs1P35441 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Thbs1P35441 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Thbs1P35441 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Thbs1P35441 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Thbs1P35441 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.33■□□□□ 0.52
Thbs1P35441 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Thbs1P35441 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Thbs1P35441 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Thbs1P35441 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Thbs1P35441 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Thbs1P35441 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Thbs1P35441 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.32■□□□□ 0.52
Thbs1P35441 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Thbs1P35441 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Thbs1P35441 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Thbs1P35441 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Thbs1P35441 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Thbs1P35441 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Thbs1P35441 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Thbs1P35441 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Thbs1P35441 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.31■□□□□ 0.52
Thbs1P35441 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Thbs1P35441 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Thbs1P35441 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Thbs1P35441 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Thbs1P35441 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Thbs1P35441 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Thbs1P35441 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.3■□□□□ 0.52
Thbs1P35441 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.3■□□□□ 0.52
Thbs1P35441 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Thbs1P35441 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.3■□□□□ 0.52
Thbs1P35441 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Thbs1P35441 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Thbs1P35441 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Thbs1P35441 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Thbs1P35441 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.3■□□□□ 0.52
Thbs1P35441 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Thbs1P35441 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.29■□□□□ 0.52
Thbs1P35441 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Thbs1P35441 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Thbs1P35441 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Thbs1P35441 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Thbs1P35441 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.29■□□□□ 0.52
Thbs1P35441 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Thbs1P35441 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.29■□□□□ 0.52
Thbs1P35441 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Thbs1P35441 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Thbs1P35441 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Thbs1P35441 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Thbs1P35441 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Thbs1P35441 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Thbs1P35441 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Thbs1P35441 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Thbs1P35441 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Thbs1P35441 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Thbs1P35441 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Thbs1P35441 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Thbs1P35441 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Thbs1P35441 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.27■□□□□ 0.52
Thbs1P35441 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Thbs1P35441 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.27■□□□□ 0.52
Thbs1P35441 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Thbs1P35441 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.27■□□□□ 0.52
Thbs1P35441 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Thbs1P35441 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Thbs1P35441 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Thbs1P35441 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Thbs1P35441 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Thbs1P35441 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Thbs1P35441 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Thbs1P35441 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Thbs1P35441 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Thbs1P35441 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Thbs1P35441 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Thbs1P35441 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.26■□□□□ 0.51
Thbs1P35441 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Thbs1P35441 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Thbs1P35441 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Thbs1P35441 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Thbs1P35441 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.25■□□□□ 0.51
Thbs1P35441 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Thbs1P35441 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Thbs1P35441 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.25■□□□□ 0.51
Thbs1P35441 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Thbs1P35441 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Thbs1P35441 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Thbs1P35441 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Thbs1P35441 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Thbs1P35441 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Thbs1P35441 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Thbs1P35441 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Thbs1P35441 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Thbs1P35441 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Thbs1P35441 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Thbs1P35441 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Thbs1P35441 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Thbs1P35441 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
Thbs1P35441 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Thbs1P35441 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms