Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp13P33435 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp13P33435 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.25■□□□□ 0.83
Mmp13P33435 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp13P33435 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp13P33435 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp13P33435 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp13P33435 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Mmp13P33435 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp13P33435 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp13P33435 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp13P33435 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp13P33435 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp13P33435 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp13P33435 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp13P33435 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp13P33435 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp13P33435 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.23■□□□□ 0.83
Mmp13P33435 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.23■□□□□ 0.83
Mmp13P33435 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.23■□□□□ 0.83
Mmp13P33435 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp13P33435 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Mmp13P33435 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp13P33435 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.22■□□□□ 0.83
Mmp13P33435 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp13P33435 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp13P33435 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp13P33435 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp13P33435 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp13P33435 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp13P33435 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Mmp13P33435 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp13P33435 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp13P33435 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Mmp13P33435 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp13P33435 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp13P33435 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp13P33435 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp13P33435 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp13P33435 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp13P33435 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
Mmp13P33435 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.21■□□□□ 0.83
Mmp13P33435 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp13P33435 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp13P33435 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp13P33435 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Mmp13P33435 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp13P33435 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Mmp13P33435 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.2■□□□□ 0.82
Mmp13P33435 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.2■□□□□ 0.82
Mmp13P33435 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp13P33435 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp13P33435 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.2■□□□□ 0.82
Mmp13P33435 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Mmp13P33435 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp13P33435 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp13P33435 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp13P33435 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.19■□□□□ 0.82
Mmp13P33435 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp13P33435 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Mmp13P33435 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp13P33435 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp13P33435 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.19■□□□□ 0.82
Mmp13P33435 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp13P33435 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp13P33435 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Mmp13P33435 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp13P33435 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.19■□□□□ 0.82
Mmp13P33435 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp13P33435 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.18■□□□□ 0.82
Mmp13P33435 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp13P33435 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp13P33435 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp13P33435 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp13P33435 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp13P33435 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp13P33435 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp13P33435 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.17■□□□□ 0.82
Mmp13P33435 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp13P33435 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp13P33435 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp13P33435 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp13P33435 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Mmp13P33435 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp13P33435 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.17■□□□□ 0.82
Mmp13P33435 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp13P33435 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.17■□□□□ 0.82
Mmp13P33435 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp13P33435 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp13P33435 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp13P33435 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
Mmp13P33435 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp13P33435 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp13P33435 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp13P33435 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp13P33435 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
Mmp13P33435 Gm9847-201ENSMUST00000052528 599 ntBASIC20.16■□□□□ 0.82
Mmp13P33435 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Mmp13P33435 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp13P33435 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms