Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a1P31648 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Slc6a1P31648 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a1P31648 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a1P31648 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a1P31648 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a1P31648 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a1P31648 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a1P31648 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a1P31648 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a1P31648 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a1P31648 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a1P31648 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.97■□□□□ 0.31
Slc6a1P31648 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a1P31648 Gm45444-201ENSMUST00000211394 898 ntBASIC16.97■□□□□ 0.31
Slc6a1P31648 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.97■□□□□ 0.31
Slc6a1P31648 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Slc6a1P31648 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.97■□□□□ 0.31
Slc6a1P31648 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.97■□□□□ 0.31
Slc6a1P31648 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a1P31648 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a1P31648 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a1P31648 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a1P31648 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Slc6a1P31648 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.96■□□□□ 0.31
Slc6a1P31648 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Slc6a1P31648 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a1P31648 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a1P31648 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a1P31648 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Slc6a1P31648 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a1P31648 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
Slc6a1P31648 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Slc6a1P31648 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Slc6a1P31648 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Slc6a1P31648 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Slc6a1P31648 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.96■□□□□ 0.3
Slc6a1P31648 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Slc6a1P31648 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a1P31648 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a1P31648 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.95■□□□□ 0.3
Slc6a1P31648 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a1P31648 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Slc6a1P31648 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a1P31648 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.95■□□□□ 0.3
Slc6a1P31648 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.95■□□□□ 0.3
Slc6a1P31648 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a1P31648 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.95■□□□□ 0.3
Slc6a1P31648 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a1P31648 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a1P31648 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a1P31648 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a1P31648 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slc6a1P31648 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a1P31648 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.94■□□□□ 0.3
Slc6a1P31648 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a1P31648 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Slc6a1P31648 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.94■□□□□ 0.3
Slc6a1P31648 Rarb-207ENSMUST00000225921 2756 ntBASIC16.94■□□□□ 0.3
Slc6a1P31648 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Slc6a1P31648 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a1P31648 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Slc6a1P31648 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a1P31648 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a1P31648 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Slc6a1P31648 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.94■□□□□ 0.3
Slc6a1P31648 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc6a1P31648 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.93■□□□□ 0.3
Slc6a1P31648 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a1P31648 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.93■□□□□ 0.3
Slc6a1P31648 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a1P31648 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Slc6a1P31648 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a1P31648 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a1P31648 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a1P31648 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.93■□□□□ 0.3
Slc6a1P31648 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc6a1P31648 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a1P31648 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a1P31648 Gm15546-201ENSMUST00000122095 826 ntBASIC16.92■□□□□ 0.3
Slc6a1P31648 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.92■□□□□ 0.3
Slc6a1P31648 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a1P31648 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a1P31648 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a1P31648 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Slc6a1P31648 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a1P31648 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc6a1P31648 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a1P31648 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a1P31648 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a1P31648 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a1P31648 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Slc6a1P31648 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a1P31648 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a1P31648 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.91■□□□□ 0.3
Slc6a1P31648 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a1P31648 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Slc6a1P31648 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a1P31648 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc6a1P31648 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms