Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
H2afxP27661 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
H2afxP27661 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
H2afxP27661 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
H2afxP27661 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
H2afxP27661 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
H2afxP27661 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
H2afxP27661 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.84■□□□□ 0.93
H2afxP27661 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
H2afxP27661 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.83■□□□□ 0.93
H2afxP27661 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
H2afxP27661 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
H2afxP27661 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.83■□□□□ 0.92
H2afxP27661 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
H2afxP27661 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.83■□□□□ 0.92
H2afxP27661 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
H2afxP27661 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
H2afxP27661 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
H2afxP27661 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
H2afxP27661 BC021767-201ENSMUST00000126387 1716 ntBASIC20.82■□□□□ 0.92
H2afxP27661 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
H2afxP27661 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
H2afxP27661 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
H2afxP27661 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
H2afxP27661 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
H2afxP27661 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.81■□□□□ 0.92
H2afxP27661 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
H2afxP27661 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
H2afxP27661 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
H2afxP27661 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
H2afxP27661 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
H2afxP27661 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.8■□□□□ 0.92
H2afxP27661 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H2afxP27661 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
H2afxP27661 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
H2afxP27661 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
H2afxP27661 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
H2afxP27661 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
H2afxP27661 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.8■□□□□ 0.92
H2afxP27661 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
H2afxP27661 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
H2afxP27661 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
H2afxP27661 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
H2afxP27661 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
H2afxP27661 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
H2afxP27661 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
H2afxP27661 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
H2afxP27661 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
H2afxP27661 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
H2afxP27661 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
H2afxP27661 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.78■□□□□ 0.92
H2afxP27661 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
H2afxP27661 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
H2afxP27661 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.78■□□□□ 0.92
H2afxP27661 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
H2afxP27661 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.78■□□□□ 0.92
H2afxP27661 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
H2afxP27661 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
H2afxP27661 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
H2afxP27661 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2afxP27661 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2afxP27661 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2afxP27661 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
H2afxP27661 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2afxP27661 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.77■□□□□ 0.92
H2afxP27661 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2afxP27661 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
H2afxP27661 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
H2afxP27661 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
H2afxP27661 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
H2afxP27661 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
H2afxP27661 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2afxP27661 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2afxP27661 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.76■□□□□ 0.91
H2afxP27661 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.76■□□□□ 0.91
H2afxP27661 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
H2afxP27661 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2afxP27661 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
H2afxP27661 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afxP27661 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afxP27661 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
H2afxP27661 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H2afxP27661 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afxP27661 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.75■□□□□ 0.91
H2afxP27661 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
H2afxP27661 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afxP27661 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
H2afxP27661 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afxP27661 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afxP27661 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
H2afxP27661 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.74■□□□□ 0.91
H2afxP27661 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
H2afxP27661 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
H2afxP27661 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.74■□□□□ 0.91
H2afxP27661 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
H2afxP27661 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.74■□□□□ 0.91
H2afxP27661 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2afxP27661 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2afxP27661 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
H2afxP27661 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms