Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.39■□□□□ 0.85
Nfkb1P25799 Gm10493-201ENSMUST00000097270 612 ntBASIC20.39■□□□□ 0.85
Nfkb1P25799 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nfkb1P25799 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nfkb1P25799 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
Nfkb1P25799 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nfkb1P25799 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nfkb1P25799 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nfkb1P25799 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nfkb1P25799 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.38■□□□□ 0.85
Nfkb1P25799 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Nfkb1P25799 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nfkb1P25799 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nfkb1P25799 Gm11421-201ENSMUST00000122124 294 ntBASIC20.38■□□□□ 0.85
Nfkb1P25799 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nfkb1P25799 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nfkb1P25799 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Nfkb1P25799 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.38■□□□□ 0.85
Nfkb1P25799 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nfkb1P25799 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nfkb1P25799 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nfkb1P25799 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Nfkb1P25799 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.37■□□□□ 0.85
Nfkb1P25799 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.37■□□□□ 0.85
Nfkb1P25799 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nfkb1P25799 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
Nfkb1P25799 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nfkb1P25799 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nfkb1P25799 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nfkb1P25799 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.37■□□□□ 0.85
Nfkb1P25799 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nfkb1P25799 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nfkb1P25799 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
Nfkb1P25799 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nfkb1P25799 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nfkb1P25799 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nfkb1P25799 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.36■□□□□ 0.85
Nfkb1P25799 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nfkb1P25799 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Nfkb1P25799 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nfkb1P25799 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nfkb1P25799 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.36■□□□□ 0.85
Nfkb1P25799 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nfkb1P25799 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nfkb1P25799 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Nfkb1P25799 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Nfkb1P25799 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Nfkb1P25799 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Nfkb1P25799 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Nfkb1P25799 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.35■□□□□ 0.85
Nfkb1P25799 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Nfkb1P25799 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nfkb1P25799 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.35■□□□□ 0.85
Nfkb1P25799 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Nfkb1P25799 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Nfkb1P25799 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nfkb1P25799 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nfkb1P25799 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.34■□□□□ 0.85
Nfkb1P25799 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.34■□□□□ 0.85
Nfkb1P25799 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.34■□□□□ 0.85
Nfkb1P25799 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.34■□□□□ 0.85
Nfkb1P25799 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Nfkb1P25799 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nfkb1P25799 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.34■□□□□ 0.85
Nfkb1P25799 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nfkb1P25799 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Nfkb1P25799 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nfkb1P25799 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.33■□□□□ 0.85
Nfkb1P25799 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Nfkb1P25799 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Nfkb1P25799 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.33■□□□□ 0.85
Nfkb1P25799 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.33■□□□□ 0.84
Nfkb1P25799 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nfkb1P25799 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Nfkb1P25799 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Nfkb1P25799 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nfkb1P25799 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nfkb1P25799 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nfkb1P25799 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nfkb1P25799 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Nfkb1P25799 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.32■□□□□ 0.84
Nfkb1P25799 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nfkb1P25799 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nfkb1P25799 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nfkb1P25799 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nfkb1P25799 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Nfkb1P25799 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nfkb1P25799 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Nfkb1P25799 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nfkb1P25799 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Nfkb1P25799 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nfkb1P25799 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Nfkb1P25799 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nfkb1P25799 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Nfkb1P25799 Gm26571-201ENSMUST00000181399 666 ntBASIC20.3■□□□□ 0.84
Nfkb1P25799 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nfkb1P25799 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.3■□□□□ 0.84
Nfkb1P25799 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nfkb1P25799 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Nfkb1P25799 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms