Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Srp54P14576 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Srp54P14576 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Srp54P14576 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Srp54P14576 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srp54P14576 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Srp54P14576 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srp54P14576 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srp54P14576 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.44■□□□□ 0.7
Srp54P14576 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Srp54P14576 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srp54P14576 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Srp54P14576 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Srp54P14576 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Srp54P14576 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Srp54P14576 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Srp54P14576 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.43■□□□□ 0.7
Srp54P14576 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Srp54P14576 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Srp54P14576 Gm5874-201ENSMUST00000096101 508 ntBASIC19.43■□□□□ 0.7
Srp54P14576 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Srp54P14576 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Srp54P14576 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Srp54P14576 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Srp54P14576 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.43■□□□□ 0.7
Srp54P14576 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Srp54P14576 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Srp54P14576 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Srp54P14576 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Srp54P14576 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srp54P14576 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srp54P14576 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srp54P14576 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Srp54P14576 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srp54P14576 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Srp54P14576 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.42■□□□□ 0.7
Srp54P14576 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Srp54P14576 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp54P14576 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Srp54P14576 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Srp54P14576 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp54P14576 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp54P14576 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Srp54P14576 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Srp54P14576 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp54P14576 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp54P14576 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.4■□□□□ 0.7
Srp54P14576 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp54P14576 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp54P14576 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Srp54P14576 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Srp54P14576 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srp54P14576 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srp54P14576 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.39■□□□□ 0.69
Srp54P14576 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srp54P14576 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Srp54P14576 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.39■□□□□ 0.69
Srp54P14576 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srp54P14576 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Srp54P14576 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.39■□□□□ 0.69
Srp54P14576 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Srp54P14576 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Srp54P14576 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.39■□□□□ 0.69
Srp54P14576 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Srp54P14576 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.38■□□□□ 0.69
Srp54P14576 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Srp54P14576 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.38■□□□□ 0.69
Srp54P14576 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Srp54P14576 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Srp54P14576 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Srp54P14576 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Srp54P14576 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.37■□□□□ 0.69
Srp54P14576 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp54P14576 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp54P14576 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.37■□□□□ 0.69
Srp54P14576 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp54P14576 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp54P14576 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Srp54P14576 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp54P14576 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Srp54P14576 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp54P14576 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.37■□□□□ 0.69
Srp54P14576 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.37■□□□□ 0.69
Srp54P14576 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Srp54P14576 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Srp54P14576 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp54P14576 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Srp54P14576 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Srp54P14576 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Srp54P14576 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Srp54P14576 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srp54P14576 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
Srp54P14576 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Srp54P14576 Gm11421-201ENSMUST00000122124 294 ntBASIC19.36■□□□□ 0.69
Srp54P14576 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.36■□□□□ 0.69
Srp54P14576 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.36■□□□□ 0.69
Srp54P14576 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srp54P14576 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srp54P14576 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Srp54P14576 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms