Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccl3P10855 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Ccl3P10855 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccl3P10855 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl3P10855 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ccl3P10855 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl3P10855 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl3P10855 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl3P10855 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl3P10855 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.63■□□□□ 0.41
Ccl3P10855 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.63■□□□□ 0.41
Ccl3P10855 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl3P10855 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl3P10855 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl3P10855 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ccl3P10855 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl3P10855 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl3P10855 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccl3P10855 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccl3P10855 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccl3P10855 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccl3P10855 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccl3P10855 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccl3P10855 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccl3P10855 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccl3P10855 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccl3P10855 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl3P10855 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl3P10855 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.6■□□□□ 0.41
Ccl3P10855 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl3P10855 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl3P10855 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.6■□□□□ 0.41
Ccl3P10855 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl3P10855 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.6■□□□□ 0.41
Ccl3P10855 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.6■□□□□ 0.41
Ccl3P10855 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.6■□□□□ 0.41
Ccl3P10855 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl3P10855 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl3P10855 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccl3P10855 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl3P10855 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl3P10855 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ccl3P10855 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl3P10855 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl3P10855 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl3P10855 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl3P10855 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.59■□□□□ 0.41
Ccl3P10855 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.59■□□□□ 0.41
Ccl3P10855 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ccl3P10855 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl3P10855 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl3P10855 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccl3P10855 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccl3P10855 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccl3P10855 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccl3P10855 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccl3P10855 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ccl3P10855 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.58■□□□□ 0.4
Ccl3P10855 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccl3P10855 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccl3P10855 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccl3P10855 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccl3P10855 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccl3P10855 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl3P10855 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Ccl3P10855 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl3P10855 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl3P10855 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl3P10855 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ccl3P10855 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl3P10855 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.57■□□□□ 0.4
Ccl3P10855 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccl3P10855 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl3P10855 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl3P10855 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccl3P10855 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl3P10855 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ccl3P10855 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl3P10855 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl3P10855 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ccl3P10855 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccl3P10855 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ccl3P10855 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.56■□□□□ 0.4
Ccl3P10855 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccl3P10855 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl3P10855 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl3P10855 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.56■□□□□ 0.4
Ccl3P10855 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl3P10855 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccl3P10855 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.56■□□□□ 0.4
Ccl3P10855 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl3P10855 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl3P10855 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ccl3P10855 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccl3P10855 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccl3P10855 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccl3P10855 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl3P10855 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl3P10855 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccl3P10855 Mir5133-201ENSMUST00000174955 77 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms