Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh3P10287 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh3P10287 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh3P10287 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
Cdh3P10287 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh3P10287 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh3P10287 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cdh3P10287 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh3P10287 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh3P10287 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdh3P10287 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cdh3P10287 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh3P10287 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh3P10287 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cdh3P10287 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cdh3P10287 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh3P10287 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh3P10287 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
Cdh3P10287 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cdh3P10287 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh3P10287 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh3P10287 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh3P10287 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdh3P10287 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdh3P10287 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdh3P10287 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh3P10287 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh3P10287 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.14■□□□□ 0.49
Cdh3P10287 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh3P10287 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cdh3P10287 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh3P10287 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh3P10287 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh3P10287 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh3P10287 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh3P10287 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdh3P10287 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cdh3P10287 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.13■□□□□ 0.49
Cdh3P10287 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh3P10287 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh3P10287 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh3P10287 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh3P10287 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh3P10287 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh3P10287 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh3P10287 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh3P10287 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.13■□□□□ 0.49
Cdh3P10287 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.13■□□□□ 0.49
Cdh3P10287 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh3P10287 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.13■□□□□ 0.49
Cdh3P10287 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdh3P10287 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh3P10287 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh3P10287 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh3P10287 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh3P10287 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.12■□□□□ 0.49
Cdh3P10287 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh3P10287 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Cdh3P10287 Gm22238-201ENSMUST00000175222 88 ntBASIC18.12■□□□□ 0.49
Cdh3P10287 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.12■□□□□ 0.49
Cdh3P10287 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh3P10287 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh3P10287 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh3P10287 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh3P10287 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cdh3P10287 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.11■□□□□ 0.49
Cdh3P10287 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cdh3P10287 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cdh3P10287 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cdh3P10287 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh3P10287 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh3P10287 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh3P10287 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh3P10287 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cdh3P10287 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
Cdh3P10287 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh3P10287 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh3P10287 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh3P10287 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.1■□□□□ 0.49
Cdh3P10287 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh3P10287 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cdh3P10287 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh3P10287 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh3P10287 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cdh3P10287 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh3P10287 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cdh3P10287 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh3P10287 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh3P10287 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Cdh3P10287 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh3P10287 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh3P10287 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cdh3P10287 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Cdh3P10287 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Cdh3P10287 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdh3P10287 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdh3P10287 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.08■□□□□ 0.49
Cdh3P10287 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdh3P10287 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cdh3P10287 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms