Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim1P0C8K7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim1P0C8K7 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim1P0C8K7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim1P0C8K7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim1P0C8K7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim1P0C8K7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smim1P0C8K7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim1P0C8K7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim1P0C8K7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smim1P0C8K7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.69□□□□□ -0.22
Smim1P0C8K7 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim1P0C8K7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC13.69□□□□□ -0.22
Smim1P0C8K7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC13.69□□□□□ -0.22
Smim1P0C8K7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smim1P0C8K7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smim1P0C8K7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim1P0C8K7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smim1P0C8K7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Smim1P0C8K7 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim1P0C8K7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Smim1P0C8K7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smim1P0C8K7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim1P0C8K7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim1P0C8K7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim1P0C8K7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim1P0C8K7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim1P0C8K7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Smim1P0C8K7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim1P0C8K7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim1P0C8K7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim1P0C8K7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim1P0C8K7 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Smim1P0C8K7 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim1P0C8K7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim1P0C8K7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim1P0C8K7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim1P0C8K7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim1P0C8K7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim1P0C8K7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim1P0C8K7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smim1P0C8K7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim1P0C8K7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim1P0C8K7 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smim1P0C8K7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim1P0C8K7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim1P0C8K7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim1P0C8K7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim1P0C8K7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC13.67□□□□□ -0.22
Smim1P0C8K7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim1P0C8K7 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.67□□□□□ -0.22
Smim1P0C8K7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim1P0C8K7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim1P0C8K7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim1P0C8K7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smim1P0C8K7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim1P0C8K7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smim1P0C8K7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim1P0C8K7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim1P0C8K7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smim1P0C8K7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smim1P0C8K7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smim1P0C8K7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim1P0C8K7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smim1P0C8K7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smim1P0C8K7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smim1P0C8K7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smim1P0C8K7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smim1P0C8K7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smim1P0C8K7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smim1P0C8K7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smim1P0C8K7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smim1P0C8K7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smim1P0C8K7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smim1P0C8K7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smim1P0C8K7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.65□□□□□ -0.22
Smim1P0C8K7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smim1P0C8K7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.65□□□□□ -0.22
Smim1P0C8K7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smim1P0C8K7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smim1P0C8K7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smim1P0C8K7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Smim1P0C8K7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smim1P0C8K7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Smim1P0C8K7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC13.64□□□□□ -0.23
Smim1P0C8K7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smim1P0C8K7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smim1P0C8K7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smim1P0C8K7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smim1P0C8K7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC13.64□□□□□ -0.23
Smim1P0C8K7 Nsd1-206ENSMUST00000224918 1001 ntBASIC13.64□□□□□ -0.23
Smim1P0C8K7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smim1P0C8K7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smim1P0C8K7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smim1P0C8K7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smim1P0C8K7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smim1P0C8K7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smim1P0C8K7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.63□□□□□ -0.23
Smim1P0C8K7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smim1P0C8K7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms