Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rc3h2P0C090 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rc3h2P0C090 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rc3h2P0C090 Gm7291-201ENSMUST00000199147 382 ntBASIC20.2■□□□□ 0.82
Rc3h2P0C090 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rc3h2P0C090 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rc3h2P0C090 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.2■□□□□ 0.82
Rc3h2P0C090 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rc3h2P0C090 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rc3h2P0C090 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rc3h2P0C090 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rc3h2P0C090 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rc3h2P0C090 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.19■□□□□ 0.82
Rc3h2P0C090 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rc3h2P0C090 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Rc3h2P0C090 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rc3h2P0C090 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rc3h2P0C090 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rc3h2P0C090 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rc3h2P0C090 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rc3h2P0C090 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rc3h2P0C090 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rc3h2P0C090 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rc3h2P0C090 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rc3h2P0C090 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
Rc3h2P0C090 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rc3h2P0C090 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rc3h2P0C090 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.18■□□□□ 0.82
Rc3h2P0C090 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rc3h2P0C090 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rc3h2P0C090 Gm42569-201ENSMUST00000200539 472 ntBASIC20.18■□□□□ 0.82
Rc3h2P0C090 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rc3h2P0C090 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Rc3h2P0C090 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rc3h2P0C090 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rc3h2P0C090 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h2P0C090 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Rc3h2P0C090 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h2P0C090 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h2P0C090 Gm10849-201ENSMUST00000100397 618 ntBASIC20.17■□□□□ 0.82
Rc3h2P0C090 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h2P0C090 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Rc3h2P0C090 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.17■□□□□ 0.82
Rc3h2P0C090 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h2P0C090 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h2P0C090 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rc3h2P0C090 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
Rc3h2P0C090 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rc3h2P0C090 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rc3h2P0C090 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rc3h2P0C090 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.16■□□□□ 0.82
Rc3h2P0C090 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rc3h2P0C090 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.16■□□□□ 0.82
Rc3h2P0C090 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rc3h2P0C090 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.16■□□□□ 0.82
Rc3h2P0C090 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.16■□□□□ 0.82
Rc3h2P0C090 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.16■□□□□ 0.82
Rc3h2P0C090 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rc3h2P0C090 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.16■□□□□ 0.82
Rc3h2P0C090 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rc3h2P0C090 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rc3h2P0C090 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rc3h2P0C090 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rc3h2P0C090 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rc3h2P0C090 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rc3h2P0C090 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rc3h2P0C090 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Rc3h2P0C090 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rc3h2P0C090 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.15■□□□□ 0.82
Rc3h2P0C090 Gm27405-201ENSMUST00000184201 112 ntBASIC20.15■□□□□ 0.82
Rc3h2P0C090 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rc3h2P0C090 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rc3h2P0C090 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rc3h2P0C090 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rc3h2P0C090 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rc3h2P0C090 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rc3h2P0C090 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.82
Rc3h2P0C090 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.14■□□□□ 0.81
Rc3h2P0C090 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rc3h2P0C090 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rc3h2P0C090 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.14■□□□□ 0.81
Rc3h2P0C090 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rc3h2P0C090 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rc3h2P0C090 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rc3h2P0C090 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rc3h2P0C090 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rc3h2P0C090 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rc3h2P0C090 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rc3h2P0C090 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rc3h2P0C090 Gm10033-202ENSMUST00000211874 928 ntBASIC20.12■□□□□ 0.81
Rc3h2P0C090 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rc3h2P0C090 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rc3h2P0C090 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rc3h2P0C090 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rc3h2P0C090 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Rc3h2P0C090 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rc3h2P0C090 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rc3h2P0C090 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rc3h2P0C090 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rc3h2P0C090 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 143.1 ms