Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxa9P09631 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxa9P09631 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hoxa9P09631 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.98■□□□□ 0.79
Hoxa9P09631 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxa9P09631 Gm10033-202ENSMUST00000211874 928 ntBASIC19.98■□□□□ 0.79
Hoxa9P09631 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Hoxa9P09631 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hoxa9P09631 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Hoxa9P09631 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxa9P09631 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxa9P09631 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxa9P09631 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxa9P09631 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hoxa9P09631 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxa9P09631 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxa9P09631 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxa9P09631 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Hoxa9P09631 Gm37179-201ENSMUST00000194862 823 ntBASIC19.96■□□□□ 0.79
Hoxa9P09631 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxa9P09631 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Hoxa9P09631 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxa9P09631 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxa9P09631 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxa9P09631 Notumos-201ENSMUST00000151998 2659 ntBASIC19.95■□□□□ 0.78
Hoxa9P09631 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Hoxa9P09631 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.95■□□□□ 0.78
Hoxa9P09631 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.95■□□□□ 0.78
Hoxa9P09631 AV356131-201ENSMUST00000206201 750 ntBASIC19.95■□□□□ 0.78
Hoxa9P09631 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxa9P09631 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxa9P09631 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Hoxa9P09631 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.94■□□□□ 0.78
Hoxa9P09631 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxa9P09631 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
Hoxa9P09631 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.94■□□□□ 0.78
Hoxa9P09631 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.94■□□□□ 0.78
Hoxa9P09631 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxa9P09631 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxa9P09631 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxa9P09631 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxa9P09631 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxa9P09631 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Hoxa9P09631 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxa9P09631 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hoxa9P09631 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
Hoxa9P09631 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxa9P09631 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hoxa9P09631 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxa9P09631 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hoxa9P09631 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.93■□□□□ 0.78
Hoxa9P09631 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxa9P09631 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.93■□□□□ 0.78
Hoxa9P09631 Gm42778-201ENSMUST00000199644 553 ntBASIC19.93■□□□□ 0.78
Hoxa9P09631 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxa9P09631 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.93■□□□□ 0.78
Hoxa9P09631 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hoxa9P09631 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxa9P09631 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.92■□□□□ 0.78
Hoxa9P09631 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxa9P09631 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxa9P09631 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.92■□□□□ 0.78
Hoxa9P09631 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.92■□□□□ 0.78
Hoxa9P09631 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxa9P09631 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxa9P09631 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hoxa9P09631 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxa9P09631 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxa9P09631 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxa9P09631 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Hoxa9P09631 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hoxa9P09631 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxa9P09631 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxa9P09631 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxa9P09631 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxa9P09631 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxa9P09631 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxa9P09631 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxa9P09631 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.9■□□□□ 0.78
Hoxa9P09631 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxa9P09631 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxa9P09631 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxa9P09631 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Hoxa9P09631 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxa9P09631 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxa9P09631 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hoxa9P09631 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.89■□□□□ 0.77
Hoxa9P09631 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxa9P09631 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxa9P09631 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxa9P09631 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxa9P09631 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.89■□□□□ 0.77
Hoxa9P09631 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hoxa9P09631 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
Hoxa9P09631 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxa9P09631 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Hoxa9P09631 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Hoxa9P09631 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxa9P09631 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hoxa9P09631 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms