Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxa4P06798 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxa4P06798 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.59■□□□□ 0.73
Hoxa4P06798 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxa4P06798 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxa4P06798 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.59■□□□□ 0.73
Hoxa4P06798 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
Hoxa4P06798 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.59■□□□□ 0.73
Hoxa4P06798 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxa4P06798 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxa4P06798 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxa4P06798 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxa4P06798 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxa4P06798 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.58■□□□□ 0.73
Hoxa4P06798 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxa4P06798 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxa4P06798 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxa4P06798 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.58■□□□□ 0.73
Hoxa4P06798 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Hoxa4P06798 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Hoxa4P06798 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.58■□□□□ 0.73
Hoxa4P06798 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.58■□□□□ 0.72
Hoxa4P06798 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxa4P06798 Serp2-204ENSMUST00000228055 705 ntBASIC19.58■□□□□ 0.72
Hoxa4P06798 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Hoxa4P06798 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxa4P06798 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxa4P06798 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.58■□□□□ 0.72
Hoxa4P06798 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxa4P06798 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Hoxa4P06798 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa4P06798 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa4P06798 Gm43017-201ENSMUST00000198296 752 ntBASIC19.57■□□□□ 0.72
Hoxa4P06798 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.57■□□□□ 0.72
Hoxa4P06798 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa4P06798 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa4P06798 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxa4P06798 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa4P06798 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa4P06798 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Hoxa4P06798 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
Hoxa4P06798 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Hoxa4P06798 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Hoxa4P06798 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.56■□□□□ 0.72
Hoxa4P06798 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Hoxa4P06798 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa4P06798 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa4P06798 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa4P06798 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa4P06798 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxa4P06798 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxa4P06798 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.55■□□□□ 0.72
Hoxa4P06798 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Hoxa4P06798 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.55■□□□□ 0.72
Hoxa4P06798 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.55■□□□□ 0.72
Hoxa4P06798 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxa4P06798 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxa4P06798 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Hoxa4P06798 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxa4P06798 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Hoxa4P06798 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxa4P06798 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxa4P06798 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.54■□□□□ 0.72
Hoxa4P06798 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Hoxa4P06798 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Hoxa4P06798 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxa4P06798 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxa4P06798 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxa4P06798 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxa4P06798 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxa4P06798 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxa4P06798 Gm26833-201ENSMUST00000180899 440 ntBASIC19.53■□□□□ 0.72
Hoxa4P06798 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxa4P06798 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxa4P06798 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Hoxa4P06798 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxa4P06798 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxa4P06798 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxa4P06798 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.53■□□□□ 0.72
Hoxa4P06798 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Hoxa4P06798 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.52■□□□□ 0.72
Hoxa4P06798 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.52■□□□□ 0.72
Hoxa4P06798 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxa4P06798 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hoxa4P06798 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Hoxa4P06798 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Hoxa4P06798 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxa4P06798 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Hoxa4P06798 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Hoxa4P06798 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxa4P06798 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxa4P06798 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.51■□□□□ 0.71
Hoxa4P06798 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.51■□□□□ 0.71
Hoxa4P06798 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxa4P06798 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxa4P06798 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Hoxa4P06798 AA386476-201ENSMUST00000098781 1665 ntBASIC19.51■□□□□ 0.71
Hoxa4P06798 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.5■□□□□ 0.71
Hoxa4P06798 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxa4P06798 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms