Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PrnpP04925 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PrnpP04925 Gm7514-201ENSMUST00000209475 934 ntBASIC20.69■□□□□ 0.9
PrnpP04925 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PrnpP04925 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
PrnpP04925 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PrnpP04925 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PrnpP04925 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PrnpP04925 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PrnpP04925 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PrnpP04925 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PrnpP04925 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.68■□□□□ 0.9
PrnpP04925 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PrnpP04925 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PrnpP04925 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PrnpP04925 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PrnpP04925 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PrnpP04925 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
PrnpP04925 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.67■□□□□ 0.9
PrnpP04925 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PrnpP04925 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.67■□□□□ 0.9
PrnpP04925 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PrnpP04925 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
PrnpP04925 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PrnpP04925 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PrnpP04925 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PrnpP04925 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PrnpP04925 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PrnpP04925 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.66■□□□□ 0.9
PrnpP04925 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PrnpP04925 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PrnpP04925 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PrnpP04925 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PrnpP04925 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
PrnpP04925 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PrnpP04925 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PrnpP04925 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PrnpP04925 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.65■□□□□ 0.9
PrnpP04925 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PrnpP04925 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PrnpP04925 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PrnpP04925 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PrnpP04925 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PrnpP04925 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PrnpP04925 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.65■□□□□ 0.9
PrnpP04925 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PrnpP04925 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PrnpP04925 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.64■□□□□ 0.89
PrnpP04925 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.64■□□□□ 0.89
PrnpP04925 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PrnpP04925 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PrnpP04925 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PrnpP04925 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PrnpP04925 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PrnpP04925 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PrnpP04925 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.63■□□□□ 0.89
PrnpP04925 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PrnpP04925 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PrnpP04925 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PrnpP04925 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.63■□□□□ 0.89
PrnpP04925 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PrnpP04925 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PrnpP04925 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
PrnpP04925 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PrnpP04925 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.62■□□□□ 0.89
PrnpP04925 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PrnpP04925 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PrnpP04925 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PrnpP04925 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PrnpP04925 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PrnpP04925 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PrnpP04925 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PrnpP04925 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PrnpP04925 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PrnpP04925 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.61■□□□□ 0.89
PrnpP04925 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.61■□□□□ 0.89
PrnpP04925 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PrnpP04925 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PrnpP04925 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PrnpP04925 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.6■□□□□ 0.89
PrnpP04925 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PrnpP04925 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PrnpP04925 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PrnpP04925 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PrnpP04925 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PrnpP04925 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PrnpP04925 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PrnpP04925 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PrnpP04925 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PrnpP04925 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PrnpP04925 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PrnpP04925 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PrnpP04925 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PrnpP04925 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.58■□□□□ 0.89
PrnpP04925 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PrnpP04925 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PrnpP04925 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PrnpP04925 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PrnpP04925 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PrnpP04925 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms