Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cd74P04441 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cd74P04441 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd74P04441 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.51■□□□□ 0.23
Cd74P04441 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cd74P04441 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Cd74P04441 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd74P04441 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd74P04441 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cd74P04441 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd74P04441 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cd74P04441 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd74P04441 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cd74P04441 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd74P04441 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd74P04441 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cd74P04441 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cd74P04441 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cd74P04441 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd74P04441 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cd74P04441 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cd74P04441 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cd74P04441 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cd74P04441 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd74P04441 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd74P04441 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cd74P04441 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cd74P04441 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Cd74P04441 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC16.5■□□□□ 0.23
Cd74P04441 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.5■□□□□ 0.23
Cd74P04441 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd74P04441 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cd74P04441 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd74P04441 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd74P04441 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd74P04441 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cd74P04441 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cd74P04441 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.49■□□□□ 0.23
Cd74P04441 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd74P04441 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cd74P04441 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd74P04441 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd74P04441 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cd74P04441 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cd74P04441 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Cd74P04441 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.49■□□□□ 0.23
Cd74P04441 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.49■□□□□ 0.23
Cd74P04441 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd74P04441 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd74P04441 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cd74P04441 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cd74P04441 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cd74P04441 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cd74P04441 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd74P04441 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cd74P04441 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.48■□□□□ 0.23
Cd74P04441 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd74P04441 Gm45417-201ENSMUST00000209533 758 ntBASIC16.48■□□□□ 0.23
Cd74P04441 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cd74P04441 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd74P04441 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cd74P04441 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cd74P04441 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd74P04441 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.47■□□□□ 0.23
Cd74P04441 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd74P04441 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cd74P04441 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd74P04441 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd74P04441 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cd74P04441 Gm7143-201ENSMUST00000222811 859 ntBASIC16.47■□□□□ 0.23
Cd74P04441 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cd74P04441 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.47■□□□□ 0.23
Cd74P04441 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd74P04441 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd74P04441 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cd74P04441 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd74P04441 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd74P04441 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd74P04441 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd74P04441 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cd74P04441 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
Cd74P04441 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd74P04441 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd74P04441 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd74P04441 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cd74P04441 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd74P04441 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cd74P04441 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Cd74P04441 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.46■□□□□ 0.23
Cd74P04441 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cd74P04441 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.45■□□□□ 0.22
Cd74P04441 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cd74P04441 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd74P04441 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Cd74P04441 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd74P04441 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd74P04441 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Cd74P04441 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd74P04441 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Cd74P04441 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms