Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Col4a1P02463 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Col4a1P02463 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Col4a1P02463 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
Col4a1P02463 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col4a1P02463 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Col4a1P02463 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col4a1P02463 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Col4a1P02463 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col4a1P02463 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col4a1P02463 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col4a1P02463 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col4a1P02463 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Col4a1P02463 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC24.84■■□□□ 1.57
Col4a1P02463 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Col4a1P02463 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Col4a1P02463 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Col4a1P02463 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Col4a1P02463 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC24.83■■□□□ 1.57
Col4a1P02463 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
Col4a1P02463 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Col4a1P02463 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Col4a1P02463 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Col4a1P02463 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Col4a1P02463 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Col4a1P02463 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Col4a1P02463 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC24.82■■□□□ 1.56
Col4a1P02463 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
Col4a1P02463 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Col4a1P02463 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
Col4a1P02463 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC24.82■■□□□ 1.56
Col4a1P02463 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Col4a1P02463 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Col4a1P02463 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
Col4a1P02463 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Col4a1P02463 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Col4a1P02463 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Col4a1P02463 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Col4a1P02463 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC24.81■■□□□ 1.56
Col4a1P02463 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Col4a1P02463 Gm12504-201ENSMUST00000120860 2231 ntBASIC24.81■■□□□ 1.56
Col4a1P02463 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Col4a1P02463 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Col4a1P02463 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col4a1P02463 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Col4a1P02463 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC24.8■■□□□ 1.56
Col4a1P02463 Spcs1-207ENSMUST00000228767 1008 ntBASIC24.8■■□□□ 1.56
Col4a1P02463 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
Col4a1P02463 Gm10571-201ENSMUST00000097869 1638 ntBASIC24.8■■□□□ 1.56
Col4a1P02463 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Col4a1P02463 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col4a1P02463 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Col4a1P02463 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
Col4a1P02463 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col4a1P02463 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Col4a1P02463 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col4a1P02463 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col4a1P02463 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC24.78■■□□□ 1.56
Col4a1P02463 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Col4a1P02463 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC24.78■■□□□ 1.56
Col4a1P02463 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col4a1P02463 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Col4a1P02463 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Col4a1P02463 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col4a1P02463 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col4a1P02463 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col4a1P02463 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
Col4a1P02463 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Col4a1P02463 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC24.77■■□□□ 1.56
Col4a1P02463 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC24.77■■□□□ 1.56
Col4a1P02463 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
Col4a1P02463 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Col4a1P02463 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Col4a1P02463 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Col4a1P02463 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Col4a1P02463 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC24.76■■□□□ 1.55
Col4a1P02463 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Col4a1P02463 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Col4a1P02463 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC24.76■■□□□ 1.55
Col4a1P02463 CT010467.1-202ENSMUST00000205406 714 ntBASIC24.75■■□□□ 1.55
Col4a1P02463 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col4a1P02463 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC24.75■■□□□ 1.55
Col4a1P02463 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col4a1P02463 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col4a1P02463 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col4a1P02463 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col4a1P02463 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Col4a1P02463 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col4a1P02463 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC24.74■■□□□ 1.55
Col4a1P02463 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC24.74■■□□□ 1.55
Col4a1P02463 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col4a1P02463 Gm17641-201ENSMUST00000166328 2350 ntBASIC24.74■■□□□ 1.55
Col4a1P02463 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Col4a1P02463 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col4a1P02463 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC24.74■■□□□ 1.55
Col4a1P02463 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC24.74■■□□□ 1.55
Col4a1P02463 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col4a1P02463 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col4a1P02463 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Col4a1P02463 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms