Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
P01734 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.63■■□□□ 1.05
P01734 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
P01734 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
P01734 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
P01734 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.62■■□□□ 1.05
P01734 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
P01734 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
P01734 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
P01734 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
P01734 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
P01734 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
P01734 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
P01734 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
P01734 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.62■■□□□ 1.05
P01734 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
P01734 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
P01734 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
P01734 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
P01734 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
P01734 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
P01734 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
P01734 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
P01734 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
P01734 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.61■■□□□ 1.05
P01734 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
P01734 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.61■■□□□ 1.05
P01734 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.61■■□□□ 1.05
P01734 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.61■■□□□ 1.05
P01734 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
P01734 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
P01734 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
P01734 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
P01734 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
P01734 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
P01734 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
P01734 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
P01734 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
P01734 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
P01734 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.59■■□□□ 1.05
P01734 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
P01734 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
P01734 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.59■■□□□ 1.05
P01734 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
P01734 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.59■■□□□ 1.05
P01734 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.59■■□□□ 1.05
P01734 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
P01734 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
P01734 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.59■■□□□ 1.05
P01734 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
P01734 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.58■■□□□ 1.05
P01734 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
P01734 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
P01734 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
P01734 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
P01734 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
P01734 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
P01734 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
P01734 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
P01734 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
P01734 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
P01734 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.57■■□□□ 1.04
P01734 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
P01734 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
P01734 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
P01734 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
P01734 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.57■■□□□ 1.04
P01734 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
P01734 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
P01734 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
P01734 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.56■■□□□ 1.04
P01734 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
P01734 Smad6-203ENSMUST00000179458 273 ntBASIC21.56■■□□□ 1.04
P01734 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.56■■□□□ 1.04
P01734 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
P01734 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
P01734 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
P01734 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
P01734 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
P01734 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
P01734 Gm26833-201ENSMUST00000180899 440 ntBASIC21.55■■□□□ 1.04
P01734 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
P01734 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
P01734 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
P01734 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.55■■□□□ 1.04
P01734 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
P01734 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
P01734 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
P01734 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
P01734 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
P01734 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
P01734 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
P01734 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
P01734 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
P01734 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
P01734 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
P01734 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
P01734 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.54■■□□□ 1.04
P01734 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
P01734 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms