Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Abcd4O89016 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.85■□□□□ 0.45
Abcd4O89016 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.85■□□□□ 0.45
Abcd4O89016 Gm18284-201ENSMUST00000172604 624 ntBASIC17.85■□□□□ 0.45
Abcd4O89016 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Abcd4O89016 Gm8495-201ENSMUST00000188740 694 ntBASIC17.85■□□□□ 0.45
Abcd4O89016 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
Abcd4O89016 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcd4O89016 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcd4O89016 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcd4O89016 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Abcd4O89016 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcd4O89016 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcd4O89016 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Abcd4O89016 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.84■□□□□ 0.45
Abcd4O89016 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.84■□□□□ 0.45
Abcd4O89016 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abcd4O89016 Gm43173-201ENSMUST00000202246 593 ntBASIC17.84■□□□□ 0.45
Abcd4O89016 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.84■□□□□ 0.45
Abcd4O89016 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abcd4O89016 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abcd4O89016 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abcd4O89016 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Abcd4O89016 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abcd4O89016 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.84■□□□□ 0.45
Abcd4O89016 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abcd4O89016 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Abcd4O89016 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Abcd4O89016 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Abcd4O89016 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Abcd4O89016 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
Abcd4O89016 Gm12251-201ENSMUST00000117893 792 ntBASIC17.83■□□□□ 0.44
Abcd4O89016 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Abcd4O89016 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Abcd4O89016 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.83■□□□□ 0.44
Abcd4O89016 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
Abcd4O89016 Spcs1-204ENSMUST00000226782 949 ntBASIC17.83■□□□□ 0.44
Abcd4O89016 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Abcd4O89016 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Abcd4O89016 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Abcd4O89016 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Abcd4O89016 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.83■□□□□ 0.44
Abcd4O89016 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Abcd4O89016 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcd4O89016 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcd4O89016 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcd4O89016 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcd4O89016 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcd4O89016 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Abcd4O89016 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Abcd4O89016 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcd4O89016 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Abcd4O89016 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcd4O89016 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Abcd4O89016 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Abcd4O89016 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abcd4O89016 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abcd4O89016 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abcd4O89016 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.81■□□□□ 0.44
Abcd4O89016 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Abcd4O89016 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abcd4O89016 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Abcd4O89016 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abcd4O89016 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Abcd4O89016 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.81■□□□□ 0.44
Abcd4O89016 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Abcd4O89016 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.8■□□□□ 0.44
Abcd4O89016 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.8■□□□□ 0.44
Abcd4O89016 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.8■□□□□ 0.44
Abcd4O89016 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Abcd4O89016 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abcd4O89016 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Abcd4O89016 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Abcd4O89016 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Abcd4O89016 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Abcd4O89016 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.8■□□□□ 0.44
Abcd4O89016 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abcd4O89016 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abcd4O89016 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Abcd4O89016 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Abcd4O89016 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Abcd4O89016 Gm26833-201ENSMUST00000180899 440 ntBASIC17.79■□□□□ 0.44
Abcd4O89016 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Abcd4O89016 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abcd4O89016 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abcd4O89016 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abcd4O89016 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Abcd4O89016 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.78■□□□□ 0.44
Abcd4O89016 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Abcd4O89016 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Abcd4O89016 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.78■□□□□ 0.44
Abcd4O89016 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abcd4O89016 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Abcd4O89016 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abcd4O89016 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abcd4O89016 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Abcd4O89016 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Abcd4O89016 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Abcd4O89016 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Abcd4O89016 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms