Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a20bO88575 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a20bO88575 Gm13168-201ENSMUST00000121771 632 ntBASIC21.82■■□□□ 1.08
Slc6a20bO88575 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.82■■□□□ 1.08
Slc6a20bO88575 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a20bO88575 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.82■■□□□ 1.08
Slc6a20bO88575 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a20bO88575 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a20bO88575 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Slc6a20bO88575 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
Slc6a20bO88575 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc6a20bO88575 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Slc6a20bO88575 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc6a20bO88575 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Slc6a20bO88575 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.81■■□□□ 1.08
Slc6a20bO88575 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.81■■□□□ 1.08
Slc6a20bO88575 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc6a20bO88575 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Slc6a20bO88575 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc6a20bO88575 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.8■■□□□ 1.08
Slc6a20bO88575 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Slc6a20bO88575 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.8■■□□□ 1.08
Slc6a20bO88575 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc6a20bO88575 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.8■■□□□ 1.08
Slc6a20bO88575 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Slc6a20bO88575 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Slc6a20bO88575 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.8■■□□□ 1.08
Slc6a20bO88575 Gm5408-201ENSMUST00000197998 747 ntBASIC21.8■■□□□ 1.08
Slc6a20bO88575 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.8■■□□□ 1.08
Slc6a20bO88575 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Slc6a20bO88575 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a20bO88575 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Slc6a20bO88575 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a20bO88575 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a20bO88575 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.79■■□□□ 1.08
Slc6a20bO88575 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
Slc6a20bO88575 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.79■■□□□ 1.08
Slc6a20bO88575 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a20bO88575 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.79■■□□□ 1.08
Slc6a20bO88575 Gm20049-201ENSMUST00000219950 730 ntBASIC21.79■■□□□ 1.08
Slc6a20bO88575 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a20bO88575 Gm6365-201ENSMUST00000054711 744 ntBASIC21.79■■□□□ 1.08
Slc6a20bO88575 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a20bO88575 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a20bO88575 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Slc6a20bO88575 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a20bO88575 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a20bO88575 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Slc6a20bO88575 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Slc6a20bO88575 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a20bO88575 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a20bO88575 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a20bO88575 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Slc6a20bO88575 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.78■■□□□ 1.08
Slc6a20bO88575 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.78■■□□□ 1.08
Slc6a20bO88575 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a20bO88575 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
Slc6a20bO88575 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Slc6a20bO88575 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a20bO88575 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.77■■□□□ 1.08
Slc6a20bO88575 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.77■■□□□ 1.08
Slc6a20bO88575 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a20bO88575 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Slc6a20bO88575 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.77■■□□□ 1.08
Slc6a20bO88575 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.76■■□□□ 1.07
Slc6a20bO88575 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a20bO88575 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a20bO88575 Gm7290-201ENSMUST00000104990 617 ntBASIC21.76■■□□□ 1.07
Slc6a20bO88575 Gm12918-201ENSMUST00000120234 636 ntBASIC21.76■■□□□ 1.07
Slc6a20bO88575 Gm15710-201ENSMUST00000121821 636 ntBASIC21.76■■□□□ 1.07
Slc6a20bO88575 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.76■■□□□ 1.07
Slc6a20bO88575 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a20bO88575 Gm5075-201ENSMUST00000196916 622 ntBASIC21.76■■□□□ 1.07
Slc6a20bO88575 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a20bO88575 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slc6a20bO88575 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.76■■□□□ 1.07
Slc6a20bO88575 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.76■■□□□ 1.07
Slc6a20bO88575 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.75■■□□□ 1.07
Slc6a20bO88575 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a20bO88575 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a20bO88575 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a20bO88575 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Slc6a20bO88575 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Slc6a20bO88575 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Slc6a20bO88575 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a20bO88575 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a20bO88575 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Slc6a20bO88575 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.74■■□□□ 1.07
Slc6a20bO88575 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a20bO88575 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a20bO88575 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a20bO88575 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a20bO88575 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Slc6a20bO88575 Gm13146-201ENSMUST00000118508 780 ntBASIC21.74■■□□□ 1.07
Slc6a20bO88575 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a20bO88575 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.74■■□□□ 1.07
Slc6a20bO88575 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.74■■□□□ 1.07
Slc6a20bO88575 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a20bO88575 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc6a20bO88575 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms