Protein–RNA interactions for Protein: O88572

Lrp6, Low-density lipoprotein receptor-related protein 6, mousemouse

Predictions only

Length 1,613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrp6O88572 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Lrp6O88572 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Lrp6O88572 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Lrp6O88572 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Lrp6O88572 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Lrp6O88572 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Lrp6O88572 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC26.32■■□□□ 1.8
Lrp6O88572 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Lrp6O88572 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC26.32■■□□□ 1.8
Lrp6O88572 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Lrp6O88572 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Lrp6O88572 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Lrp6O88572 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Lrp6O88572 Gm6576-201ENSMUST00000169678 883 ntBASIC26.32■■□□□ 1.8
Lrp6O88572 AL672049.1-201ENSMUST00000197943 91 ntBASIC26.32■■□□□ 1.8
Lrp6O88572 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Lrp6O88572 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Lrp6O88572 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Lrp6O88572 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Lrp6O88572 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Lrp6O88572 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Lrp6O88572 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Lrp6O88572 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Lrp6O88572 CT030146.1-201ENSMUST00000220919 217 ntBASIC26.3■■□□□ 1.8
Lrp6O88572 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Lrp6O88572 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Lrp6O88572 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Lrp6O88572 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Lrp6O88572 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Lrp6O88572 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Lrp6O88572 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Lrp6O88572 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Lrp6O88572 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Lrp6O88572 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Lrp6O88572 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC26.28■■□□□ 1.8
Lrp6O88572 Gm44672-201ENSMUST00000206944 1098 ntBASIC26.28■■□□□ 1.8
Lrp6O88572 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Lrp6O88572 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Lrp6O88572 Gm10571-201ENSMUST00000097869 1638 ntBASIC26.28■■□□□ 1.8
Lrp6O88572 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Lrp6O88572 Gm10655-201ENSMUST00000098658 1397 ntBASIC26.28■■□□□ 1.8
Lrp6O88572 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Lrp6O88572 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Lrp6O88572 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Lrp6O88572 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Lrp6O88572 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Lrp6O88572 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC26.27■■□□□ 1.8
Lrp6O88572 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Lrp6O88572 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Lrp6O88572 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Lrp6O88572 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
Lrp6O88572 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC26.26■■□□□ 1.79
Lrp6O88572 Arhgef33-211ENSMUST00000225658 473 ntBASIC26.26■■□□□ 1.79
Lrp6O88572 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Lrp6O88572 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Lrp6O88572 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Lrp6O88572 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Lrp6O88572 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Lrp6O88572 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
Lrp6O88572 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Lrp6O88572 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
Lrp6O88572 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC26.24■■□□□ 1.79
Lrp6O88572 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC26.24■■□□□ 1.79
Lrp6O88572 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC26.24■■□□□ 1.79
Lrp6O88572 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC26.24■■□□□ 1.79
Lrp6O88572 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Lrp6O88572 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Lrp6O88572 Gm10819-201ENSMUST00000099988 561 ntBASIC26.24■■□□□ 1.79
Lrp6O88572 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Lrp6O88572 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Lrp6O88572 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Lrp6O88572 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Lrp6O88572 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
Lrp6O88572 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC26.23■■□□□ 1.79
Lrp6O88572 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Lrp6O88572 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC26.22■■□□□ 1.79
Lrp6O88572 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC26.22■■□□□ 1.79
Lrp6O88572 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Lrp6O88572 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Lrp6O88572 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Lrp6O88572 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Lrp6O88572 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Lrp6O88572 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Lrp6O88572 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Lrp6O88572 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Lrp6O88572 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Lrp6O88572 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Lrp6O88572 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Lrp6O88572 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Lrp6O88572 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Lrp6O88572 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Lrp6O88572 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC26.21■■□□□ 1.79
Lrp6O88572 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Lrp6O88572 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Lrp6O88572 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC26.21■■□□□ 1.79
Lrp6O88572 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Lrp6O88572 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC26.2■■□□□ 1.78
Lrp6O88572 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Lrp6O88572 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Lrp6O88572 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms