Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cops4O88544 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
Cops4O88544 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cops4O88544 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cops4O88544 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops4O88544 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cops4O88544 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cops4O88544 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.22■□□□□ 0.51
Cops4O88544 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cops4O88544 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.22■□□□□ 0.51
Cops4O88544 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops4O88544 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops4O88544 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops4O88544 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops4O88544 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cops4O88544 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cops4O88544 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cops4O88544 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cops4O88544 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cops4O88544 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cops4O88544 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Cops4O88544 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cops4O88544 Gm45444-201ENSMUST00000211394 898 ntBASIC18.21■□□□□ 0.51
Cops4O88544 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cops4O88544 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cops4O88544 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cops4O88544 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cops4O88544 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cops4O88544 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cops4O88544 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cops4O88544 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.2■□□□□ 0.5
Cops4O88544 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cops4O88544 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cops4O88544 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cops4O88544 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cops4O88544 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cops4O88544 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops4O88544 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops4O88544 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops4O88544 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cops4O88544 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.19■□□□□ 0.5
Cops4O88544 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cops4O88544 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.19■□□□□ 0.5
Cops4O88544 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cops4O88544 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cops4O88544 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.19■□□□□ 0.5
Cops4O88544 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cops4O88544 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cops4O88544 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops4O88544 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops4O88544 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops4O88544 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops4O88544 Golph3-205ENSMUST00000228671 2842 ntBASIC18.19■□□□□ 0.5
Cops4O88544 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.19■□□□□ 0.5
Cops4O88544 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops4O88544 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Cops4O88544 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops4O88544 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops4O88544 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops4O88544 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cops4O88544 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cops4O88544 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.18■□□□□ 0.5
Cops4O88544 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cops4O88544 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cops4O88544 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.18■□□□□ 0.5
Cops4O88544 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cops4O88544 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cops4O88544 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cops4O88544 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cops4O88544 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cops4O88544 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cops4O88544 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cops4O88544 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cops4O88544 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cops4O88544 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cops4O88544 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cops4O88544 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.17■□□□□ 0.5
Cops4O88544 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cops4O88544 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Cops4O88544 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.17■□□□□ 0.5
Cops4O88544 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cops4O88544 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cops4O88544 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cops4O88544 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cops4O88544 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cops4O88544 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cops4O88544 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cops4O88544 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cops4O88544 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.16■□□□□ 0.5
Cops4O88544 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cops4O88544 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cops4O88544 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops4O88544 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops4O88544 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops4O88544 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cops4O88544 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cops4O88544 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cops4O88544 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cops4O88544 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cops4O88544 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms