Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cops3O88543 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cops3O88543 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops3O88543 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops3O88543 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops3O88543 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.69■□□□□ 0.42
Cops3O88543 Gm7143-201ENSMUST00000222811 859 ntBASIC17.69■□□□□ 0.42
Cops3O88543 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops3O88543 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cops3O88543 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Cops3O88543 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cops3O88543 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops3O88543 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cops3O88543 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cops3O88543 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
Cops3O88543 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops3O88543 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops3O88543 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.68■□□□□ 0.42
Cops3O88543 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops3O88543 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops3O88543 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Cops3O88543 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops3O88543 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops3O88543 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops3O88543 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cops3O88543 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cops3O88543 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cops3O88543 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cops3O88543 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cops3O88543 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cops3O88543 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cops3O88543 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cops3O88543 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cops3O88543 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.67■□□□□ 0.42
Cops3O88543 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Cops3O88543 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cops3O88543 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cops3O88543 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cops3O88543 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops3O88543 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops3O88543 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops3O88543 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops3O88543 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cops3O88543 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.66■□□□□ 0.42
Cops3O88543 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.66■□□□□ 0.42
Cops3O88543 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.66■□□□□ 0.42
Cops3O88543 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.66■□□□□ 0.42
Cops3O88543 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cops3O88543 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cops3O88543 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cops3O88543 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.65■□□□□ 0.42
Cops3O88543 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cops3O88543 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cops3O88543 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cops3O88543 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cops3O88543 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cops3O88543 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.64■□□□□ 0.41
Cops3O88543 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops3O88543 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Cops3O88543 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops3O88543 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops3O88543 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cops3O88543 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cops3O88543 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cops3O88543 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Cops3O88543 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cops3O88543 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cops3O88543 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cops3O88543 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.63■□□□□ 0.41
Cops3O88543 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cops3O88543 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cops3O88543 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.63■□□□□ 0.41
Cops3O88543 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cops3O88543 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.63■□□□□ 0.41
Cops3O88543 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops3O88543 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.62■□□□□ 0.41
Cops3O88543 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cops3O88543 Gm40881-201ENSMUST00000223397 166 ntBASIC17.62■□□□□ 0.41
Cops3O88543 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops3O88543 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cops3O88543 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops3O88543 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops3O88543 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops3O88543 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cops3O88543 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops3O88543 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops3O88543 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.61■□□□□ 0.41
Cops3O88543 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops3O88543 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops3O88543 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops3O88543 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops3O88543 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.61■□□□□ 0.41
Cops3O88543 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cops3O88543 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops3O88543 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops3O88543 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops3O88543 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops3O88543 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cops3O88543 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cops3O88543 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms