Protein–RNA interactions for Protein: O88520

Shoc2, Leucine-rich repeat protein SHOC-2, mousemouse

Known RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shoc2O88520 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shoc2O88520 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Shoc2O88520 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Shoc2O88520 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Shoc2O88520 Golgb1-201ENSMUST00000023534 498 ntBASIC20.49■□□□□ 0.87
Shoc2O88520 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shoc2O88520 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shoc2O88520 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shoc2O88520 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shoc2O88520 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shoc2O88520 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Shoc2O88520 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Shoc2O88520 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Shoc2O88520 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.48■□□□□ 0.87
Shoc2O88520 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shoc2O88520 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.48■□□□□ 0.87
Shoc2O88520 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shoc2O88520 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shoc2O88520 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shoc2O88520 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Shoc2O88520 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shoc2O88520 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shoc2O88520 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Shoc2O88520 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shoc2O88520 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Shoc2O88520 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Shoc2O88520 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Shoc2O88520 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Shoc2O88520 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Shoc2O88520 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Shoc2O88520 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.47■□□□□ 0.87
Shoc2O88520 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
Shoc2O88520 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shoc2O88520 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Shoc2O88520 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Shoc2O88520 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shoc2O88520 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Shoc2O88520 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Shoc2O88520 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Shoc2O88520 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Shoc2O88520 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shoc2O88520 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Shoc2O88520 Iqck-206ENSMUST00000208658 2891 ntBASIC20.45■□□□□ 0.86
Shoc2O88520 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shoc2O88520 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shoc2O88520 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shoc2O88520 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Shoc2O88520 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shoc2O88520 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.45■□□□□ 0.86
Shoc2O88520 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Shoc2O88520 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shoc2O88520 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shoc2O88520 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Shoc2O88520 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.44■□□□□ 0.86
Shoc2O88520 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.44■□□□□ 0.86
Shoc2O88520 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shoc2O88520 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shoc2O88520 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shoc2O88520 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.43■□□□□ 0.86
Shoc2O88520 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.43■□□□□ 0.86
Shoc2O88520 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shoc2O88520 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.43■□□□□ 0.86
Shoc2O88520 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shoc2O88520 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shoc2O88520 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shoc2O88520 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shoc2O88520 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shoc2O88520 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Shoc2O88520 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shoc2O88520 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Shoc2O88520 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shoc2O88520 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shoc2O88520 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shoc2O88520 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Shoc2O88520 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Shoc2O88520 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shoc2O88520 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Shoc2O88520 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shoc2O88520 Gm21956-201ENSMUST00000179946 522 ntBASIC20.41■□□□□ 0.86
Shoc2O88520 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.41■□□□□ 0.86
Shoc2O88520 Gm43530-201ENSMUST00000195920 274 ntBASIC20.41■□□□□ 0.86
Shoc2O88520 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.41■□□□□ 0.86
Shoc2O88520 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Shoc2O88520 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shoc2O88520 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Shoc2O88520 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Shoc2O88520 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shoc2O88520 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Shoc2O88520 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shoc2O88520 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Shoc2O88520 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Shoc2O88520 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shoc2O88520 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Shoc2O88520 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shoc2O88520 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shoc2O88520 Gm13241-201ENSMUST00000094493 780 ntBASIC20.4■□□□□ 0.86
Shoc2O88520 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shoc2O88520 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Shoc2O88520 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.39■□□□□ 0.85
Shoc2O88520 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms