Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Gm10399-202ENSMUST00000202768 748 ntBASIC18.47■□□□□ 0.55
Tulp3O88413 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.47■□□□□ 0.55
Tulp3O88413 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Tulp3O88413 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tulp3O88413 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Tulp3O88413 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
Tulp3O88413 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tulp3O88413 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tulp3O88413 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tulp3O88413 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Tulp3O88413 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.46■□□□□ 0.55
Tulp3O88413 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.46■□□□□ 0.55
Tulp3O88413 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tulp3O88413 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tulp3O88413 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Tulp3O88413 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Tulp3O88413 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Tulp3O88413 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Tulp3O88413 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tulp3O88413 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tulp3O88413 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Tulp3O88413 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Tulp3O88413 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tulp3O88413 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tulp3O88413 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tulp3O88413 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tulp3O88413 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Tulp3O88413 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tulp3O88413 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tulp3O88413 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Tulp3O88413 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Tulp3O88413 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Tulp3O88413 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.44■□□□□ 0.54
Tulp3O88413 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Tulp3O88413 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Tulp3O88413 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tulp3O88413 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Tulp3O88413 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tulp3O88413 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tulp3O88413 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tulp3O88413 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tulp3O88413 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tulp3O88413 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Tulp3O88413 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.43■□□□□ 0.54
Tulp3O88413 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.43■□□□□ 0.54
Tulp3O88413 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tulp3O88413 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tulp3O88413 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Tulp3O88413 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tulp3O88413 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tulp3O88413 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tulp3O88413 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tulp3O88413 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tulp3O88413 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tulp3O88413 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.42■□□□□ 0.54
Tulp3O88413 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tulp3O88413 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.42■□□□□ 0.54
Tulp3O88413 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tulp3O88413 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tulp3O88413 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.42■□□□□ 0.54
Tulp3O88413 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tulp3O88413 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tulp3O88413 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tulp3O88413 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tulp3O88413 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tulp3O88413 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tulp3O88413 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tulp3O88413 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tulp3O88413 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.41■□□□□ 0.54
Tulp3O88413 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Tulp3O88413 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tulp3O88413 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tulp3O88413 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.41■□□□□ 0.54
Tulp3O88413 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tulp3O88413 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tulp3O88413 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tulp3O88413 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tulp3O88413 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tulp3O88413 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tulp3O88413 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tulp3O88413 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tulp3O88413 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tulp3O88413 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tulp3O88413 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tulp3O88413 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tulp3O88413 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tulp3O88413 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Tulp3O88413 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tulp3O88413 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tulp3O88413 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tulp3O88413 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tulp3O88413 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tulp3O88413 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tulp3O88413 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tulp3O88413 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tulp3O88413 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tulp3O88413 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.39■□□□□ 0.53
Tulp3O88413 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.39■□□□□ 0.53
Tulp3O88413 Gm7143-201ENSMUST00000222811 859 ntBASIC18.39■□□□□ 0.53
Tulp3O88413 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms