Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ttc3O88196 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ttc3O88196 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Ttc3O88196 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ttc3O88196 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ttc3O88196 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ttc3O88196 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ttc3O88196 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ttc3O88196 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ttc3O88196 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ttc3O88196 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Ttc3O88196 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ttc3O88196 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ttc3O88196 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ttc3O88196 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ttc3O88196 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.01■□□□□ 0.95
Ttc3O88196 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ttc3O88196 AV356131-201ENSMUST00000206201 750 ntBASIC21■□□□□ 0.95
Ttc3O88196 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ttc3O88196 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Ttc3O88196 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ttc3O88196 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ttc3O88196 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Ttc3O88196 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ttc3O88196 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ttc3O88196 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.99■□□□□ 0.95
Ttc3O88196 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.99■□□□□ 0.95
Ttc3O88196 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.99■□□□□ 0.95
Ttc3O88196 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ttc3O88196 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.99■□□□□ 0.95
Ttc3O88196 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ttc3O88196 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.99■□□□□ 0.95
Ttc3O88196 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ttc3O88196 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ttc3O88196 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.99■□□□□ 0.95
Ttc3O88196 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ttc3O88196 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ttc3O88196 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ttc3O88196 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ttc3O88196 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ttc3O88196 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Ttc3O88196 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.98■□□□□ 0.95
Ttc3O88196 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ttc3O88196 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ttc3O88196 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.97■□□□□ 0.95
Ttc3O88196 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ttc3O88196 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.97■□□□□ 0.95
Ttc3O88196 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ttc3O88196 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ttc3O88196 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ttc3O88196 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ttc3O88196 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ttc3O88196 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ttc3O88196 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ttc3O88196 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ttc3O88196 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ttc3O88196 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.97■□□□□ 0.95
Ttc3O88196 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.97■□□□□ 0.95
Ttc3O88196 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ttc3O88196 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ttc3O88196 Reep4-203ENSMUST00000226563 1444 ntBASIC20.97■□□□□ 0.95
Ttc3O88196 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ttc3O88196 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ttc3O88196 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ttc3O88196 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ttc3O88196 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ttc3O88196 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.96■□□□□ 0.95
Ttc3O88196 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ttc3O88196 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ttc3O88196 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.96■□□□□ 0.95
Ttc3O88196 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ttc3O88196 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ttc3O88196 Gm9988-201ENSMUST00000069786 435 ntBASIC20.96■□□□□ 0.95
Ttc3O88196 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ttc3O88196 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ttc3O88196 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.95■□□□□ 0.94
Ttc3O88196 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Ttc3O88196 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.95■□□□□ 0.94
Ttc3O88196 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ttc3O88196 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ttc3O88196 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ttc3O88196 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ttc3O88196 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ttc3O88196 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ttc3O88196 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ttc3O88196 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ttc3O88196 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ttc3O88196 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ttc3O88196 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ttc3O88196 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ttc3O88196 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.94■□□□□ 0.94
Ttc3O88196 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ttc3O88196 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ttc3O88196 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.93■□□□□ 0.94
Ttc3O88196 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ttc3O88196 Gm42778-201ENSMUST00000199644 553 ntBASIC20.93■□□□□ 0.94
Ttc3O88196 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ttc3O88196 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.93■□□□□ 0.94
Ttc3O88196 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Ttc3O88196 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms