Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pdlim1O70400 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdlim1O70400 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
Pdlim1O70400 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdlim1O70400 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pdlim1O70400 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pdlim1O70400 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdlim1O70400 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdlim1O70400 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Pdlim1O70400 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pdlim1O70400 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pdlim1O70400 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pdlim1O70400 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pdlim1O70400 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pdlim1O70400 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Pdlim1O70400 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pdlim1O70400 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pdlim1O70400 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.58■□□□□ 0.73
Pdlim1O70400 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pdlim1O70400 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pdlim1O70400 Gm12251-201ENSMUST00000117893 792 ntBASIC19.58■□□□□ 0.72
Pdlim1O70400 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.58■□□□□ 0.72
Pdlim1O70400 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pdlim1O70400 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.58■□□□□ 0.72
Pdlim1O70400 Gm6139-201ENSMUST00000079261 882 ntBASIC19.58■□□□□ 0.72
Pdlim1O70400 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pdlim1O70400 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.58■□□□□ 0.72
Pdlim1O70400 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.58■□□□□ 0.72
Pdlim1O70400 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
Pdlim1O70400 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.58■□□□□ 0.72
Pdlim1O70400 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Pdlim1O70400 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pdlim1O70400 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim1O70400 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pdlim1O70400 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Pdlim1O70400 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.57■□□□□ 0.72
Pdlim1O70400 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim1O70400 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim1O70400 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim1O70400 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim1O70400 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim1O70400 Gm8493-201ENSMUST00000196881 489 ntBASIC19.57■□□□□ 0.72
Pdlim1O70400 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim1O70400 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim1O70400 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim1O70400 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pdlim1O70400 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Pdlim1O70400 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim1O70400 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Pdlim1O70400 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.56■□□□□ 0.72
Pdlim1O70400 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim1O70400 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim1O70400 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Pdlim1O70400 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pdlim1O70400 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Pdlim1O70400 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim1O70400 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim1O70400 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.55■□□□□ 0.72
Pdlim1O70400 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.55■□□□□ 0.72
Pdlim1O70400 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.55■□□□□ 0.72
Pdlim1O70400 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim1O70400 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim1O70400 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim1O70400 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim1O70400 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim1O70400 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim1O70400 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pdlim1O70400 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pdlim1O70400 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.54■□□□□ 0.72
Pdlim1O70400 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim1O70400 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim1O70400 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim1O70400 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.54■□□□□ 0.72
Pdlim1O70400 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim1O70400 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Pdlim1O70400 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim1O70400 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim1O70400 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim1O70400 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.54■□□□□ 0.72
Pdlim1O70400 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim1O70400 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim1O70400 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim1O70400 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim1O70400 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pdlim1O70400 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.53■□□□□ 0.72
Pdlim1O70400 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim1O70400 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.53■□□□□ 0.72
Pdlim1O70400 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim1O70400 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim1O70400 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim1O70400 Gm43173-201ENSMUST00000202246 593 ntBASIC19.53■□□□□ 0.72
Pdlim1O70400 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Pdlim1O70400 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.53■□□□□ 0.72
Pdlim1O70400 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim1O70400 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pdlim1O70400 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
Pdlim1O70400 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdlim1O70400 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pdlim1O70400 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pdlim1O70400 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms