Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim3O70209 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim3O70209 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim3O70209 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim3O70209 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Pdlim3O70209 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim3O70209 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.95■□□□□ 0.46
Pdlim3O70209 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Pdlim3O70209 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pdlim3O70209 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.95■□□□□ 0.46
Pdlim3O70209 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim3O70209 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim3O70209 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim3O70209 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim3O70209 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.94■□□□□ 0.46
Pdlim3O70209 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.94■□□□□ 0.46
Pdlim3O70209 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim3O70209 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim3O70209 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim3O70209 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim3O70209 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pdlim3O70209 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.94■□□□□ 0.46
Pdlim3O70209 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pdlim3O70209 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim3O70209 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim3O70209 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pdlim3O70209 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim3O70209 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim3O70209 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.93■□□□□ 0.46
Pdlim3O70209 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim3O70209 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim3O70209 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim3O70209 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim3O70209 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pdlim3O70209 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim3O70209 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim3O70209 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim3O70209 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim3O70209 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pdlim3O70209 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.92■□□□□ 0.46
Pdlim3O70209 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.92■□□□□ 0.46
Pdlim3O70209 Gm7143-201ENSMUST00000222811 859 ntBASIC17.92■□□□□ 0.46
Pdlim3O70209 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim3O70209 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.92■□□□□ 0.46
Pdlim3O70209 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim3O70209 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim3O70209 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pdlim3O70209 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim3O70209 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim3O70209 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim3O70209 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim3O70209 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.91■□□□□ 0.46
Pdlim3O70209 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.91■□□□□ 0.46
Pdlim3O70209 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.91■□□□□ 0.46
Pdlim3O70209 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim3O70209 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim3O70209 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim3O70209 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Pdlim3O70209 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pdlim3O70209 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim3O70209 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim3O70209 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim3O70209 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pdlim3O70209 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim3O70209 Gm13238-201ENSMUST00000117655 780 ntBASIC17.9■□□□□ 0.46
Pdlim3O70209 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.9■□□□□ 0.46
Pdlim3O70209 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.9■□□□□ 0.46
Pdlim3O70209 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim3O70209 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim3O70209 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim3O70209 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim3O70209 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pdlim3O70209 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.89■□□□□ 0.46
Pdlim3O70209 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.89■□□□□ 0.45
Pdlim3O70209 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim3O70209 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim3O70209 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim3O70209 Gm43566-201ENSMUST00000196851 808 ntBASIC17.89■□□□□ 0.45
Pdlim3O70209 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pdlim3O70209 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim3O70209 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim3O70209 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim3O70209 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pdlim3O70209 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
Pdlim3O70209 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim3O70209 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pdlim3O70209 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim3O70209 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim3O70209 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim3O70209 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.88■□□□□ 0.45
Pdlim3O70209 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim3O70209 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim3O70209 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pdlim3O70209 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim3O70209 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Pdlim3O70209 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim3O70209 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim3O70209 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Pdlim3O70209 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pdlim3O70209 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms