Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chrna4O70174 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chrna4O70174 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Chrna4O70174 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chrna4O70174 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.04■□□□□ 0.8
Chrna4O70174 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chrna4O70174 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chrna4O70174 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chrna4O70174 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chrna4O70174 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.03■□□□□ 0.8
Chrna4O70174 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chrna4O70174 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Chrna4O70174 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chrna4O70174 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Chrna4O70174 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Chrna4O70174 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chrna4O70174 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chrna4O70174 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chrna4O70174 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Chrna4O70174 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chrna4O70174 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chrna4O70174 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chrna4O70174 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.02■□□□□ 0.8
Chrna4O70174 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chrna4O70174 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chrna4O70174 Gm13241-201ENSMUST00000094493 780 ntBASIC20.02■□□□□ 0.8
Chrna4O70174 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chrna4O70174 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.02■□□□□ 0.8
Chrna4O70174 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chrna4O70174 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Chrna4O70174 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chrna4O70174 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chrna4O70174 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chrna4O70174 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Chrna4O70174 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Chrna4O70174 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.01■□□□□ 0.79
Chrna4O70174 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.01■□□□□ 0.79
Chrna4O70174 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chrna4O70174 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Chrna4O70174 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chrna4O70174 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chrna4O70174 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Chrna4O70174 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chrna4O70174 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.01■□□□□ 0.79
Chrna4O70174 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Chrna4O70174 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chrna4O70174 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Chrna4O70174 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20■□□□□ 0.79
Chrna4O70174 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20■□□□□ 0.79
Chrna4O70174 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chrna4O70174 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20■□□□□ 0.79
Chrna4O70174 Notumos-201ENSMUST00000151998 2659 ntBASIC20■□□□□ 0.79
Chrna4O70174 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Chrna4O70174 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20■□□□□ 0.79
Chrna4O70174 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chrna4O70174 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chrna4O70174 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chrna4O70174 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Chrna4O70174 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chrna4O70174 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20■□□□□ 0.79
Chrna4O70174 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chrna4O70174 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Chrna4O70174 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.99■□□□□ 0.79
Chrna4O70174 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chrna4O70174 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Chrna4O70174 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chrna4O70174 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chrna4O70174 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.98■□□□□ 0.79
Chrna4O70174 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Chrna4O70174 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.98■□□□□ 0.79
Chrna4O70174 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chrna4O70174 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chrna4O70174 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chrna4O70174 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chrna4O70174 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.98■□□□□ 0.79
Chrna4O70174 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.98■□□□□ 0.79
Chrna4O70174 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chrna4O70174 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.98■□□□□ 0.79
Chrna4O70174 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Chrna4O70174 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chrna4O70174 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Chrna4O70174 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chrna4O70174 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna4O70174 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna4O70174 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna4O70174 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna4O70174 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
Chrna4O70174 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna4O70174 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Chrna4O70174 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna4O70174 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna4O70174 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Chrna4O70174 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.97■□□□□ 0.79
Chrna4O70174 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chrna4O70174 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna4O70174 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna4O70174 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.96■□□□□ 0.79
Chrna4O70174 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.96■□□□□ 0.79
Chrna4O70174 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chrna4O70174 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms