Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh12O55134 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh12O55134 Gm43530-201ENSMUST00000195920 274 ntBASIC17.94■□□□□ 0.46
Pcdh12O55134 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh12O55134 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh12O55134 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdh12O55134 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdh12O55134 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh12O55134 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdh12O55134 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh12O55134 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdh12O55134 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh12O55134 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdh12O55134 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh12O55134 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh12O55134 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh12O55134 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.93■□□□□ 0.46
Pcdh12O55134 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh12O55134 Gm12821-201ENSMUST00000120022 600 ntBASIC17.93■□□□□ 0.46
Pcdh12O55134 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh12O55134 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh12O55134 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Pcdh12O55134 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdh12O55134 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdh12O55134 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Pcdh12O55134 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.93■□□□□ 0.46
Pcdh12O55134 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh12O55134 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdh12O55134 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pcdh12O55134 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh12O55134 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh12O55134 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh12O55134 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pcdh12O55134 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdh12O55134 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.92■□□□□ 0.46
Pcdh12O55134 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh12O55134 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.92■□□□□ 0.46
Pcdh12O55134 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh12O55134 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh12O55134 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh12O55134 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh12O55134 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh12O55134 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh12O55134 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh12O55134 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdh12O55134 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pcdh12O55134 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pcdh12O55134 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh12O55134 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh12O55134 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Pcdh12O55134 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh12O55134 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh12O55134 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh12O55134 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pcdh12O55134 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh12O55134 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh12O55134 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.91■□□□□ 0.46
Pcdh12O55134 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh12O55134 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.91■□□□□ 0.46
Pcdh12O55134 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.91■□□□□ 0.46
Pcdh12O55134 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdh12O55134 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh12O55134 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdh12O55134 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh12O55134 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh12O55134 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pcdh12O55134 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh12O55134 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh12O55134 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.9■□□□□ 0.46
Pcdh12O55134 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.9■□□□□ 0.46
Pcdh12O55134 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.9■□□□□ 0.46
Pcdh12O55134 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh12O55134 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh12O55134 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh12O55134 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdh12O55134 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdh12O55134 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdh12O55134 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdh12O55134 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdh12O55134 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh12O55134 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh12O55134 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.89■□□□□ 0.45
Pcdh12O55134 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdh12O55134 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh12O55134 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh12O55134 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh12O55134 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Pcdh12O55134 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh12O55134 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdh12O55134 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.88■□□□□ 0.45
Pcdh12O55134 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh12O55134 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh12O55134 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdh12O55134 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.88■□□□□ 0.45
Pcdh12O55134 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh12O55134 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh12O55134 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh12O55134 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh12O55134 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdh12O55134 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms