Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ChkaO54804 Etf1-202ENSMUST00000180351 108 ntBASIC20.04■□□□□ 0.8
ChkaO54804 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.04■□□□□ 0.8
ChkaO54804 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.04■□□□□ 0.8
ChkaO54804 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ChkaO54804 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ChkaO54804 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ChkaO54804 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ChkaO54804 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ChkaO54804 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ChkaO54804 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ChkaO54804 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ChkaO54804 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ChkaO54804 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ChkaO54804 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ChkaO54804 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.03■□□□□ 0.8
ChkaO54804 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ChkaO54804 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.03■□□□□ 0.8
ChkaO54804 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ChkaO54804 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ChkaO54804 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ChkaO54804 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.02■□□□□ 0.8
ChkaO54804 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ChkaO54804 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ChkaO54804 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
ChkaO54804 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ChkaO54804 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.79
ChkaO54804 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
ChkaO54804 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.02■□□□□ 0.79
ChkaO54804 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
ChkaO54804 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
ChkaO54804 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ChkaO54804 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ChkaO54804 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ChkaO54804 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.01■□□□□ 0.79
ChkaO54804 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.01■□□□□ 0.79
ChkaO54804 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ChkaO54804 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
ChkaO54804 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ChkaO54804 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
ChkaO54804 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ChkaO54804 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ChkaO54804 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ChkaO54804 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ChkaO54804 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20■□□□□ 0.79
ChkaO54804 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ChkaO54804 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ChkaO54804 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ChkaO54804 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ChkaO54804 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ChkaO54804 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ChkaO54804 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ChkaO54804 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ChkaO54804 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ChkaO54804 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
ChkaO54804 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ChkaO54804 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ChkaO54804 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
ChkaO54804 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
ChkaO54804 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
ChkaO54804 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ChkaO54804 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.98■□□□□ 0.79
ChkaO54804 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ChkaO54804 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ChkaO54804 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.98■□□□□ 0.79
ChkaO54804 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ChkaO54804 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ChkaO54804 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ChkaO54804 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ChkaO54804 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ChkaO54804 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
ChkaO54804 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ChkaO54804 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ChkaO54804 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ChkaO54804 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ChkaO54804 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.97■□□□□ 0.79
ChkaO54804 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.97■□□□□ 0.79
ChkaO54804 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.97■□□□□ 0.79
ChkaO54804 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ChkaO54804 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ChkaO54804 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ChkaO54804 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ChkaO54804 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
ChkaO54804 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ChkaO54804 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.96■□□□□ 0.79
ChkaO54804 Gm14117-201ENSMUST00000122417 843 ntBASIC19.96■□□□□ 0.79
ChkaO54804 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ChkaO54804 Gm45102-201ENSMUST00000207427 857 ntBASIC19.96■□□□□ 0.79
ChkaO54804 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.96■□□□□ 0.79
ChkaO54804 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.96■□□□□ 0.79
ChkaO54804 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ChkaO54804 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ChkaO54804 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ChkaO54804 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ChkaO54804 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ChkaO54804 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ChkaO54804 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ChkaO54804 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ChkaO54804 Gm22238-201ENSMUST00000175222 88 ntBASIC19.95■□□□□ 0.78
ChkaO54804 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms