Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DffbO54788 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.95■□□□□ 0.3
DffbO54788 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DffbO54788 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DffbO54788 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
DffbO54788 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DffbO54788 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.94■□□□□ 0.3
DffbO54788 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DffbO54788 Gm10232-201ENSMUST00000089221 720 ntBASIC16.94■□□□□ 0.3
DffbO54788 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
DffbO54788 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
DffbO54788 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DffbO54788 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DffbO54788 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.93■□□□□ 0.3
DffbO54788 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DffbO54788 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
DffbO54788 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
DffbO54788 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DffbO54788 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
DffbO54788 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DffbO54788 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DffbO54788 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DffbO54788 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DffbO54788 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DffbO54788 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
DffbO54788 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DffbO54788 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DffbO54788 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DffbO54788 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
DffbO54788 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
DffbO54788 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.92■□□□□ 0.3
DffbO54788 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
DffbO54788 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
DffbO54788 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
DffbO54788 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DffbO54788 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DffbO54788 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.92■□□□□ 0.3
DffbO54788 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DffbO54788 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
DffbO54788 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.91■□□□□ 0.3
DffbO54788 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
DffbO54788 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.91■□□□□ 0.3
DffbO54788 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.91■□□□□ 0.3
DffbO54788 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.91■□□□□ 0.3
DffbO54788 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DffbO54788 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DffbO54788 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
DffbO54788 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DffbO54788 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
DffbO54788 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
DffbO54788 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DffbO54788 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
DffbO54788 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DffbO54788 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DffbO54788 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
DffbO54788 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
DffbO54788 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
DffbO54788 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DffbO54788 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DffbO54788 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DffbO54788 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DffbO54788 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.89■□□□□ 0.29
DffbO54788 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
DffbO54788 Gm7143-201ENSMUST00000222811 859 ntBASIC16.89■□□□□ 0.29
DffbO54788 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DffbO54788 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DffbO54788 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
DffbO54788 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
DffbO54788 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DffbO54788 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DffbO54788 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DffbO54788 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DffbO54788 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
DffbO54788 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
DffbO54788 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
DffbO54788 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
DffbO54788 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.88■□□□□ 0.29
DffbO54788 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
DffbO54788 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
DffbO54788 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.88■□□□□ 0.29
DffbO54788 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DffbO54788 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DffbO54788 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DffbO54788 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
DffbO54788 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
DffbO54788 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DffbO54788 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
DffbO54788 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
DffbO54788 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.87■□□□□ 0.29
DffbO54788 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.87■□□□□ 0.29
DffbO54788 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DffbO54788 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.87■□□□□ 0.29
DffbO54788 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
DffbO54788 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
DffbO54788 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DffbO54788 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
DffbO54788 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DffbO54788 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
DffbO54788 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DffbO54788 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms